Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03152 ATGGGGAGGCACTCTTGCTGTTACAAGCAAAAACTTCGAAAGGGCTTGTGGTCGCCTGAGGAGGATGAGAAACTTCTCAGGCATATTACCAAATATGGCCATGGATGTTGGAGTTCTGTTCCTAAGCAAGCTGGTTTGCAGAGGTGCGGTAAGAGCTGCCGGCTTAGGTGGATCAATTACTTAAGACCTGATTTGAAGAGAGGTACATTCTCACAAGAAGAGGAAAACATTATCATTGAACTTCATGCAGTATTAGGGAATAGGTGGTCCCAAATTGCAGCACAATTGCCGGGAAGAACTgacaatgaaataaagaatttgTGGAATTCTTGCTTAAAGAAGAAACTCAGGCAAAGAGGTATAGACCCTGTCACTCATAAACCACTCTCTGAGGGTGAAAATGGAGAAGATAAAGAAGCAGCAGCCAGAAACCGAGAGAAAGTAGCATCAATATCTAATGAATTGAACCTCCTCAAGTCAGAAAGCTTCATGTCAGATGCAGCTTCATATGAGCAGAGACCGTCTTCTCTTGCCACAAAAGGCTACACACCAGAGATGGAAGGTTCTTCCTGCTCCAAGACTGTTAACGCAAGCAGCAACATCAATTTGATGAACAATTGCTCCAGCAAAGATTTCTTCTTAGAAAGATTTTCAACAAGCCACCAGGAAAGCTATACCACCAGTTGCCAGCCTTCAGATTTGATGGGGAATTTCCCCCTTCAAATGAGTTATGCACCTACTGATAGTCTCTCAACTaattcatactcttctcattgGTTCAACCAATCAGCAAGATCGTTTGATATGAACGCTGAATTAACTTCCAGTGCCATGTCTACTATCCTTTCACCAACAACCAGCTCGTATCACCCTGCTTCTATTTGCTACAAGCCTTCGTTTACTTTCCCCTCGGAAGATATTTCCACGGCTTCTTTCACAGTGAACGGATCCCATGACTGGGAAACCAGTGCTTCCAACAATAGAAATAACAGCATTAGAATCAATAGCAACACAGAATTGAGGTGTAACAAACCCTTAAACGCACACAACAGTATCCTTGCTTGGGGATTAGCAGATTGTAGCAACACTGGTAAAGAGACCCAAATACAACAACTGATGGAAAGCCAGACGGAAGAAGCCAAGTGGTCTGAGTACCTTCACAATCCATTCTTAATGCTGGCTGCTGTACAAAGTCAAACTCCTGAATCTTTATGCAATGAGATAAAGCCGTCCACGCATTTGTTATCTGATACTCTAGGGGCTATTTTGCCTCATAACAAGCAGCAAGATCTTTCACAACCATCTTCTATCTTTTCCAAGGACATCCAGAAACTCACAGCAGCCTTCGGACATATCTA 1358 0.4205 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENIIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEGENGEDKEAAARNREKVASISNELNLLKSESFMSDAASYEQRPSSLATKGYTPEMEGSSCSKTVNASSNINLMNNCSSKDFFLERFSTSHQESYTTSCQPSDLMGNFPLQMSYAPTDSLSTNSYSSHWFNQSARSFDMNAELTSSAMSTILSPTTSSYHPASICYKPSFTFPSEDISTASFTVNGSHDWETSASNNRNNSIRINSNTELRCNKPLNAHNSILAWGLADCSNTGKETQIQQLMESQTEEAKWSEYLHNPFLMLAAVQSQTPESLCNEIKPSTHLLSDTLGAILPHNKQQDLSQPSSIFSKDIQKLTAAFGHI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03152 452 PANTHER MYB DOMAIN PROTEIN 55 1 446 - -
Bva13g03152 452 SMART sant 13 63 IPR001005 -
Bva13g03152 452 SMART sant 66 114 IPR001005 -
Bva13g03152 452 PANTHER HOMEODOMAIN-RELATED 1 446 - -
Bva13g03152 452 Gene3D - 69 147 - -
Bva13g03152 452 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva13g03152 452 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva13g03152 452 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva13g03152 452 CDD SANT 17 61 IPR001005 -
Bva13g03152 452 Gene3D - 11 67 - -
Bva13g03152 452 MobiDBLite consensus disorder prediction 122 145 - -
Bva13g03152 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva13g03152 452 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva13g03152 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva13g03152 452 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva13g03152 452 CDD SANT 69 109 IPR001005 -
Bva13g03152 452 MobiDBLite consensus disorder prediction 122 146 - -
Bva13g03152 452 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03152 Bva-Chr13 22103118 22105185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03152 1 451 MYB Transcription Factor Family AT1G09540 39.530 7.65e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03152 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03152 K09422 - gmx:100815881 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03169 04 25908993 25910956 Bva13g03152 13 22103118 22105185 BWGD