Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03142 ATGGAAAACCAGCACCGCCGTGAATTGACCTTCTTAAACAACGGTGACTTCCTCCGCCAGAGGTTAGATCGAATAATCGAGAACTCCGCCGAGCATGGAGATCCAGCTCCGATCAAAGAAATGGATTTCTTATCGGTTTCAAGCAATAAAGTCAATGAAACCAAGAATCCTGATGATGACAACACCAATCACCGTGGATCAGCAACTGCCTTATCTGGTCGGCTTGTAAATACTGGGCTCAATTTAACCGTAACGTCAAGAGTAGAAAGTAATGAAAAGCCCAAGACACAACGAAGCACACTCGAAGGCGAATTACGGAGACTGTATGAAGAGAATCGGAAGCTGAAAACTATGCTGGAGCAAGTAACCAAAAGCTATAGCCAACTACAAGCTCAGTTCATCGTCACTttgcaaaaacaaaagccTCAGAAGGTTGAAGGAAATGGCATTTTGTCGGCCCAACAGTTAATGGAGCCACGACGACGTTCGACCAATTTAGAGGTGAATCTGAATGCGAACGATCCCTCGGTTTCTGATGACAAGACACATGAAGAGACATCAGCGTCTGATCCATCCAACACTTTGGAGGTAATGTCAAAACAACGTGACCATCCTATGATTATCGGAAAGCAGCATGCTGCTGGTCCTGATCAAGACGCTCTTGACCGCTCCTCTCAAAGTTGGGGCTCTTCCAAAAGTCCAAGGCTAGAAGAACCCAAAACTGAAGATCAAGTTGCTGAGATTCCTTTCAGAAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCCCCTATGATTAGTGATGGCTGCCAATGGAGGAAATATGGCCAAAAAATGGCCAGGGGTAACCCTTGTCCTCGTGGCTACTACCGTTGTACTATGGCCATAGGATGTCCGGTGCGTAAGcagGTGCAAAGATGCGCTGAGGACAATAGTGTACTAATAACAACTTACGAAGGCAACCACAACCACCCTCTCCCTCCGGCAGCCACTGCCATGGTTAATACTACATCGGCAGCGGCGGCTATGCTCCTATCTAGCTCAACTTCGAGCAAGGATGCCTTAACTAATCCTGCAGGCTACCTCTCCTCTGTGCCCTATGCATCAATGGCAACCCTATCAGCCACTGCACCATTCCCCACCATCACCCTTGACTTGACCCAGAGCTCCCCCGGAGCCATGCAGCTGAGCCGTGTGCCGCCGTCACTAACCTCATTTCCTCTGCCTTTCCATGGTGGTCAACAGCTACAAGGGCACCCCATGTTCTTCCCACAAAAAATACCAGCCATGGGTTTGGCCCTTCTAGGGCAGCGTCAGTTACAGGCTTCTTCGATGGTTGAGACTGTGAGCGCAGCCATTGCTTCTGATCCAAATTTTACTACAGTGCTGGCAGCAGCAATCTCATCAATCATTGGCGCATCCAGAGGCACAGATCACGGAAGTAATAATAATGGTGGAAGCACTGTTTCGCGTAATGGGATTTCTGTTTTGCCTGAGTCGTCGCAGCATCCTCATTCATGCACCACATTCTCCGCCAACta 1541 0.4809 MENQHRRELTFLNNGDFLRQRLDRIIENSAEHGDPAPIKEMDFLSVSSNKVNETKNPDDDNTNHRGSATALSGRLVNTGLNLTVTSRVESNEKPKTQRSTLEGELRRLYEENRKLKTMLEQVTKSYSQLQAQFIVTLQKQKPQKVEGNGILSAQQLMEPRRRSTNLEVNLNANDPSVSDDKTHEETSASDPSNTLEVMSKQRDHPMIIGKQHAAGPDQDALDRSSQSWGSSKSPRLEEPKTEDQVAEIPFRKARVSVRARSEAPMISDGCQWRKYGQKMARGNPCPRGYYRCTMAIGCPVRKQVQRCAEDNSVLITTYEGNHNHPLPPAATAMVNTTSAAAAMLLSSSTSSKDALTNPAGYLSSVPYASMATLSATAPFPTITLDLTQSSPGAMQLSRVPPSLTSFPLPFHGGQQLQGHPMFFPQKIPAMGLALLGQRQLQASSMVETVSAAIASDPNFTTVLAAAISSIIGASRGTDHGSNNNGGSTVSRNGISVLPESSQHPHSCTTFSAN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03142 513 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 33 512 - -
Bva13g03142 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 512 IPR044810 GO:0003700
Bva13g03142 513 SUPERFAMILY WRKY DNA-binding domain 259 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g03142 513 Gene3D WRKY domain 251 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g03142 513 MobiDBLite consensus disorder prediction 474 513 - -
Bva13g03142 513 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03142 513 MobiDBLite consensus disorder prediction 50 70 - -
Bva13g03142 513 Coils Coil 98 132 - -
Bva13g03142 513 MobiDBLite consensus disorder prediction 220 234 - -
Bva13g03142 513 MobiDBLite consensus disorder prediction 167 196 - -
Bva13g03142 513 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03142 513 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03142 513 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03142 Bva-Chr13 22047876 22050832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03142 75 471 WRKY Transcription Factor Family AT4G04450 42.958 2.44e-89 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva13g03142 WRKY 7.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03142 - - jre:109007774 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03161 04 25865193 25868218 Bva13g03142 13 22047876 22050832 BWGD