Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03132 atggAGGATGAATCGTCTCTTTCCAGCCAATCAAGGTCACAACTGGAACCCCTCATTCAGCATGGTGATTTATCCTTCTCTGCTTCTCAGTCCTTGAATGACCTTGTCTTTTTTCAGGAAATCCAACGCGACCCACAATCTTCAGGTGATCACTTATTGGCTCCCAGTGCCCCCAAGAAGAAACTCGCTCGTTGCAAGACTGCCCCTGCCTTGGTTAGCTTGCGAGAGCTCAAATCAAACAAGCCTGAAACCCCCAACCCAGAGCCCACGTCCAGTTCCATCATCAGGCAAGGTATTTGCTTGCTTGTCATATATCTTTCAATTGGAGTCGCCATATACTCTTTCAATAGGGATCATTTTTCGGGTGTAGAGACCCATCCTGTAATTGATGCTCTTTACTTCTGTATAGTCACCATGTGTACCATCGGCTATGGTGATATTGCCCCTCTAACTCCAGTAACCAAGGTGTTTGCTTGTATTTTTGTGTTGGTGGGATTCGGATTCATTGACATTTTGCTTAGTGGACTTGTCAATTACGTCCTAGACTTGCAAGAAAGCATGATCCTAACTGGGGTTCAAATGGGTGCTCACAGACATCAAGAAGGATTCTCTGCTAGAAATTACATAGTTGATGTGGAGAAGGGGCGAATGAGAATCAGATTGAAAGTGGGTTTGGCACTTGGTGTGGTGGTCTTGTGTATTGGGGTTGGAAGTTTGGTATTATATTTTGTGGAGGGTTTGAATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACCACGGTTGGGTATGGAGATAGAGCCTTTAAGACCCTCCCTGGGCGGCTCTTTGCTGCTATTTGGCTCCTCGTTTCCACATTGATGGTGGCCCGGGCTTTCCTATATTTGGCAGAGGCCAGAATTGATAAAAGGCACCGTAGAATCGCCAAGTGGGTTTTGCATAGAGATATGACTGTTGATGATTTGCTTGCTGCTGATATGAATAACACTGGTTTCATTAGcAAGTCAGAGTATATAATCTTCAAGCTGAAAGAGATGGGAAAAGTACGAGAGAAAGACATACTGCAAATCTGTGATCAATTCAACAAGCTTGATCCAACAAACTGTGGCAAGATAACGCTGCCTCATATCTTAGAGGGCCGCTTATG 1151 0.4405 MEDESSLSSQSRSQLEPLIQHGDLSFSASQSLNDLVFFQEIQRDPQSSGDHLLAPSAPKKKLARCKTAPALVSLRELKSNKPETPNPEPTSSSIIRQGICLLVIYLSIGVAIYSFNRDHFSGVETHPVIDALYFCIVTMCTIGYGDIAPLTPVTKVFACIFVLVGFGFIDILLSGLVNYVLDLQESMILTGVQMGAHRHQEGFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGVGSLVLYFVEGLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDKRHRRIAKWVLHRDMTVDDLLAADMNNTGFISKSEYIIFKLKEMGKVREKDILQICDQFNKLDPTNCGKITLPHILEGRL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03132 383 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 50 378 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva13g03132 383 PRINTS Two pore domain K+ channel signature 137 165 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva13g03132 383 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva13g03132 383 Pfam Ion channel 101 180 IPR013099 -
Bva13g03132 383 Pfam Ion channel 231 299 IPR013099 -
Bva13g03132 383 Gene3D - 207 320 - -
Bva13g03132 383 Gene3D - 88 201 - -
Bva13g03132 383 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 50 378 - -
Bva13g03132 383 SUPERFAMILY Voltage-gated potassium channels 92 180 - -
Bva13g03132 383 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Bva13g03132 383 SUPERFAMILY Voltage-gated potassium channels 214 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03132 Bva-Chr13 21996032 21997923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03132 13 379 Ion Channels AT4G01840 65.676 7.30e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03132 K05389 - rcu:8265882 526.168