Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03128 ATGAGTAGCAAGGTACTTGTCCCTGCAGTTTCTCTTATTCTCGTAGTGGGAGTTGCCTTGGGCGTTGTCGCTGTCGTCAACCACTCAGGCGGCAGCAGTAGTAGTGAAGAGAAATCGTCAGCCCATGTGAAGGCAGTGGCTGCCGTTTGCACTGGCGCAACAGACCCCAAATTTTGCCAAGACAGCCTCGGCAAGGCCAAATCCGACGATCCAAAGGAATATGTCAAAACCGTTGTACAATCAGCTTTGGACAATGTCATCAAGGTTTTCAACATGAGTGATAGGTTGTCTGTGGAGCACGGCAAGAGCGACAACGGCATCAAGATGGCCTTAGACGACTGCAAGGACCTATTGCAGTCCGCCACGCATGAACTTGAAGCCTCTATTCAAATGGTTCATGAGAAAGACCTCAACGccattattaaagaaaattcagcTGAGCTCAAGAACTGGTTGGGTGCTGTCATTGCATACCAGCAATCATGCATGGAGGGCTTTGACACAGACGGTGAGAAGAAGGTGCAGGATCAGTTGAATAGCGGTGGTCAGCTGGATGACGTGGGCAAGATCACTGGTTTGGCACTTGATGTGGTTACTGGCGTTTCCCAATTGCTTTCTTCCCTCAACTtgaacttgaacttgaaacCGGGCTCTCGTCGTCTTCTTGACATTGACAGTCAAGGGATGCCAACTTGGCTCTCCGCTGCCGATCGCAAGCTCTTATCTGACCTTGATGCTGCAGGATCCCCCAACGCTGTTGTAGCCAAGGATGGCAGTGGTCAATTCAATACCATCCAAGCCGCTCTTGATTCTTACCCCAAGAACCACCAGGGCAGATTTGTTATCTATGTAAAGGAAGGTGTATATGACGAGTACATCACCGTTGGCAAAAAACAAACGAACATCTTTATGTACGGTGATGGCATGACAAAGACCATCATCACCGGTAAGAAGAGCTACGCATCTGGCTGGAAGACAATGAGGACTGCCACATTTTcCGTTGTTGGTGAGGGATTTCTTTGCAAGGGAATTGCATTTGAGAACACAGCTGGTGCCAAGGGACACCAAGCAGTGGCACTACGTGTGCAATCTGATCGCTCAGCTTTCTTCGAGTGCGCTATGCATGGTTACCAAGACACCTTGTACGCACACGCCCACCGTCAGTACTACCGGGACTGTGAAATCTCCGGCACCATCGACTTCATCTTCGGCTACTCTACCACCTTGATCCAGAACTCTAAGATCATTGTGAGGAAGCCAGAATCAAACCAGCAAAACATTGTGGTTGCCGATGGCACAGTGGAAAAGAACATGCCCACAGGAATTGTCCTTCAAAACTGCCAGATCGTCGCAGATCCTGAATTGGCAGCAGATAAGACAATTAGGTCATACTTGGCCAGGCCATGGAAAGATTACTCAAGGGCCATCTTTATGGAAAGTAACATTGGTGACTTCATTCAACCAGAGGGCTGGCTTACATGGAACGGTGATCTCTATCTTCAGACCTGCTTCTTCGCTGAGTATGCCAACACTGGACCAGGTGCCAACACTGCCCAGAGAGCCAAATGGGGCAAGGGTGTCCTTTCCAGTGATGATGCTGCTCGTTACACTGCTGGACGATGGCTCCAAGCTAGCACATGGTTGCCTGCCACTGGCGTTCCTTTTACTGCTGGTTTCACCAAGGCTTA 1688 0.4858 MSSKVLVPAVSLILVVGVALGVVAVVNHSGGSSSSEEKSSAHVKAVAAVCTGATDPKFCQDSLGKAKSDDPKEYVKTVVQSALDNVIKVFNMSDRLSVEHGKSDNGIKMALDDCKDLLQSATHELEASIQMVHEKDLNAIIKENSAELKNWLGAVIAYQQSCMEGFDTDGEKKVQDQLNSGGQLDDVGKITGLALDVVTGVSQLLSSLNLNLNLKPGSRRLLDIDSQGMPTWLSAADRKLLSDLDAAGSPNAVVAKDGSGQFNTIQAALDSYPKNHQGRFVIYVKEGVYDEYITVGKKQTNIFMYGDGMTKTIITGKKSYASGWKTMRTATFSVVGEGFLCKGIAFENTAGAKGHQAVALRVQSDRSAFFECAMHGYQDTLYAHAHRQYYRDCEISGTIDFIFGYSTTLIQNSKIIVRKPESNQQNIVVADGTVEKNMPTGIVLQNCQIVADPELAADKTIRSYLARPWKDYSRAIFMESNIGDFIQPEGWLTWNGDLYLQTCFFAEYANTGPGANTAQRAKWGKGVLSSDDAARYTAGRWLQASTWLPATGVPFTAGFTKA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03128 562 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Bva13g03128 562 PANTHER PECTINESTERASE 6 559 - -
Bva13g03128 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 173 IPR035513 -
Bva13g03128 562 Gene3D - 246 559 IPR012334 -
Bva13g03128 562 Pfam Pectinesterase 251 544 IPR000070 GO:0030599|GO:0042545
Bva13g03128 562 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 174 IPR006501 GO:0004857
Bva13g03128 562 CDD PMEI-like_3 48 202 - -
Bva13g03128 562 Pfam Plant invertase/pectin methylesterase inhibitor 45 180 IPR006501 GO:0004857
Bva13g03128 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 201 IPR035513 -
Bva13g03128 562 PANTHER PECTINESTERASE 6 559 - -
Bva13g03128 562 SUPERFAMILY Pectin lyase-like 249 558 IPR011050 -
Bva13g03128 562 SMART PMEI_2 41 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03128 Bva-Chr13 21982251 21984210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03128 5 559 Carbohydrate Esterase AT3G05610 40.317 4.88e-139 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03128 K01051 - gmx:100808559 714.146