Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03124 ATGGCTGGAGATGTGAGCGGAACTAACCGCATTGGCGCCGTTTCCATGCCGGTGGCGGTGGAAGGCGGGGGTGCGGAATCGCAGTACGTGTCGGCGAAGACATCTGTATGGTGGGACATAGAGAACTGTCAGGTTCCCAAGGATTGCGACCCACACACCATCGCGCAGAATATCAGTTCCGCACTTGTCAAGATGAACTATTGTGGCGCCGTCTCCATCTCCGCCTATGGCGACACCAATCGATTGTCGGCATCTGTTCAGCAGGCGCTCTCCAGCACCGGAGTCTCCCTCAACCACGTCCCAGCCGGTGTAAAAGATGCTAGTGACAAGAAGATTTTAGTTGATATGCTGTTCTGGGCAGTAGATAACCCGGCTCCTGCAAATTATTTGCTGATTTCTGGAGATAGGGATTTTTCAAACGCTCTACATCAGTTGCGCATGAGAAGATACAATATTCTTTTAGCTCAACCATTTCAAGCATCAGCACCCCTTATTGCAGCAGCAAAAACTTTGTGGCTGTGGACAAGCCTTTTAGCTGGAGGGCCCCCACTACCTAGAGGTGACTTATCACTTACTTCGAGTGCTAACTGTAGCTTTAATTCTGAAAGGGTGCACAATTCAGTTCTTGAACCAACTCAATTAAATCAGCCGATGGTCTTGAATCCTCAGAGCATGGGAAGTCAAAAGACCTGTGCTACTGGAAGGGCTGGTATCTACAatcaaaaagggaaaaacatTTGGAAAGCCCAAAGTCAGCCCAATATCAACAACAACCTCAAGTTTCCCAGTTACACTGCTGTTTCCGAAACCTCAACAACAACCTCAAGTTTCCCAGTTACACTGCCCGAGAGTAAGAACATTGATCCTCCTAAAGCAGAACAATCACAAAAAATGCTGTTTCGGAAAGCTCCACATGAATTTTTCCGTACTAGTGAGCCCATGGTACCAACTAGTAGGTCTACTCCTAACATTTTTCCAAGCAATCTAGACTCTTTAGGAAGTAATAACTGTAACTTCAAAGATGCATTACCTAGTAGTTTGAGGCCAAGCAACCTTCATATGCAATCTATGTCAGGACCAGATAATATGCCCCTTGTTTCTCATAATCGTGGTTATCGGCCATTTGTCCCTGGTTTTGATGGTCCTCAAATATCTGCTGTCCCAAATTCGATTGTGTCTGATATAGGTAACCTACGCATTTCTGAATATCCCAATAGTGCTAAAAACCCTCCAATTTTCCATCAGCAAACCAGAGTATTTTCTAAACCAAGCACTACTCAATCCTCTAATCTAGTTAGCTTAAATGCATCACCGGCAGGCCATAATCCACGTGGTGGCCAAGCATTGCATTATGAGAATTTGAAACAGAGGCATCCTTGTGGTTTTAACCACCCTCTTCCCTTGTCCTCTACAGTCTCTGCCAATACCAGTTCTAGTAGTTTCTGGGGTTGTCCACCACCTTCTGAGCACGTGAAAGGCCTTATTGGTGTTATTCTACTAGCCTTAAACACCCTGAAGGTTGAAAAGGTTATACCTACTGAAGCGAATATAACAGATTGCATTCGTTATGGAGATCCTAAACATCAGACTACTGATGTTCACAGGGCCTTAGGTTGTGCGATTGAGCAACATATGGTAGAAAAACGAAGCTTAGGGGCAGTAGAATTGTATGTCGGTAGAAACGAGAAACTATGGAACTGTGTGAACCTCAGTGGTGGTCATCCTAATCAGTACCCAAAAGCAACATGGGATAGAATACACAAATTCCTTACTTCTGCATCTGGACAATCAGCGATTTTGGCTTCCCGGTGCAGATACGAAgcatctataattttaaagaaagagTGCCTTAAAGAGCTTGTTTTGGGTGAAGTACTGCAGATCTTGAATATGATTATCACTGTCAAGAAATGGATTATACATCATCCGTCTGGATGGCAGCCTATTACTATTACACTTACAGAGAATGCGGATGATACAGGTAGTCGTTCTGGTGTGGTGTTAAACTA 2009 0.438 MAGDVSGTNRIGAVSMPVAVEGGGAESQYVSAKTSVWWDIENCQVPKDCDPHTIAQNISSALVKMNYCGAVSISAYGDTNRLSASVQQALSSTGVSLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPFQASAPLIAAAKTLWLWTSLLAGGPPLPRGDLSLTSSANCSFNSERVHNSVLEPTQLNQPMVLNPQSMGSQKTCATGRAGIYNQKGKNIWKAQSQPNINNNLKFPSYTAVSETSTTTSSFPVTLPESKNIDPPKAEQSQKMLFRKAPHEFFRTSEPMVPTSRSTPNIFPSNLDSLGSNNCNFKDALPSSLRPSNLHMQSMSGPDNMPLVSHNRGYRPFVPGFDGPQISAVPNSIVSDIGNLRISEYPNSAKNPPIFHQQTRVFSKPSTTQSSNLVSLNASPAGHNPRGGQALHYENLKQRHPCGFNHPLPLSSTVSANTSSSSFWGCPPPSEHVKGLIGVILLALNTLKVEKVIPTEANITDCIRYGDPKHQTTDVHRALGCAIEQHMVEKRSLGAVELYVGRNEKLWNCVNLSGGHPNQYPKATWDRIHKFLTSASGQSAILASRCRYEASIILKKECLKELVLGEVLQILNMIITVKKWIIHHPSGWQPITITLTENADDTGSRSGVVLN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03124 669 Pfam OST-HTH Associated domain 602 655 IPR025677 -
Bva13g03124 669 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 21 651 - -
Bva13g03124 669 Gene3D - 27 176 - -
Bva13g03124 669 CDD PIN_limkain_b1_N_like 33 157 - -
Bva13g03124 669 Pfam NYN domain 33 169 IPR021139 GO:0004540
Bva13g03124 669 PANTHER LIMKAIN B LKAP 21 651 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03124 Bva-Chr13 21963637 21967209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03124 25 273 C2H2 Transcription Factor Family AT5G61190 59.127 5.79e-81 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03124 13 21963637 21967209 Bva13g03124 13 21963637 21967209 ECH