Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03117 ATGGACGATTGTTGTGCTGTTTGCGCTGAACCTTTGGAATGGGTCGCATACGGCCCCTGTTTGCACCGTGAGGTGTGTTCGACATGCGTTGCTCGCCTCCGTTTCATATGCGAGGATCGCCGTTGCTGCATCTGCAAAACTGAGTGCAACGTCGTATTTGTCACCAAGGCTCTAGGAGATTATACAAGGATGATTAATGACTTTTCAGCCCTGCCATCTGATGTAAGAGAGGGTAATGTGGGATCATATTGGTATCACGAGGATACAAATGCTTATTTTGATGATGTGGACCACTACAAGATGATCAAGGCTATGTGCAGGCTTTCATGCAGTGTATGTGACAAGATGGAGGAGCAGCCCCAAGATGCCTCAAAGCGCCGACAAAGGTTTAGGAATATAGAGCAGCTAAAGGGTCACTTGTTCCACCGTCATAGGTTACTTATGTGCAGATTATGTTTGGAGGGAAGAAAGGTATTTATATGTGAACAGAAGCTGTATACTAGAGCACAATTGAATCGGCATATTAGCACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCAATGTGTGAATTTTGCCGTACCCCATTTTATGGGGACAATGAATTATACACACATATGTCTAGGGAACATTATACTTGTCATATATGCCAAAGGCTGCATCCAGGACAATATGAATACTATAAGAATTATGATGATCTAGAGATCCACTTCCGTCAAGAGCATTTCTTATGTGAAGACGAGGCATGCCTTGCTAAAAAGTTTGTCGTCTTTCAATCTGAAGCAGAGATGAAGAGGCACAATACTGTTGAACATGGAGGGCGGATGTCACGGTCTAAACGGAATGCTGCTCTTCAGATACCAACCAGCTTTCGATACAGACATAGTAATGAACAGGACCAAAGACGTGCAAGGGGTCGGTCATTCCATCGTGATTTTTCTGAAAGTCAACTTTCTTTGGCCATTGAGGCTAGTTTGGAGACATCCAATGCAGAGGGTGCATTGCATGACACATCAACATCAAGCAATGTTGATCATGGCAACATTGATGTAGATCCAATCATTCAGCCATTTGAATCTTTATCTACAACAGGTTCTGAAACATCTTCAAGATATCTTCAAGCCTTAGGGCATAATTCAAAGAATGCACCGCTGGAAGATTCTTCCTTTCCTCCTCTCTCCATGGGTTCCAGCAATAACCAGCAAAAACTCAAACATGACTCAGAAGGCTCCTCTAGTAACACCATGGCAGCCCGTTTGCGCCAGCACAGTAACAGCAAAACATCTGTTCTTAATTCGGGTGCCCATGGTTGGCCAGTAGCAAGTCGTGGACATTTGCAATTATCAAGTAATTCTACACAATCTAGACCTTCACCAAATACTGTTTCCGGTGTGTCACGTAATTCTGGTCAGATGAAGACTGCCCTCAATAGTGGACCTGCACCATCAACTTATGCTAGTTCTATTCAGGCTACACACAGAACACATGAGCATATATCTCCTGGTCCTTCAAGGGATTTGCATGACAATGGTAGGATTGTTCACTCGGCTTCTGCTCCAAATCTCAGTGAGAGAGGACCTGGGGAACCTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGTGCAAGTTAGCAAGTTACCTGCAAGCAGCCAGTCAGCGCTAAATGTAGAGGATGTACACACTGCTAACAAATCATTGGTTGAAAAGATTCGAAGTGCCCTTGAATTTGATAAAGATAGATACGCTATTTTTAAAGAGATATCTGCACAATACCGCCAAGGATTAATTGATACACTTGCGTATCTGGACTATGTGGAGCAGTTTGGTTTATCTCATCTTGTGCTTGACTTGGCTCGACTATGTCCTGATCCTCTGAAGCAGAAAGAGCTTATTGACTCTTATAATGCTCGTATGCAAAGAAATTCACCAATAGAGAAAGGATGGGGCCGGGGTAAAGGTAAATCTGTAGTCAGCAATGTCTCCAAGAAAGGTAAAGGTAAATCTGTAAATGCTGAAGAGAGTAACCCCAAAGATAAATTAGCAGATAGCTTTTTAAGCACTGTACGTCAACTACAGTCAAATTGTAAGGCTTCAGAAGAGGGGTCTGATGTGCTATCAAGGGGTGATTATCGCACTACTAAAGGCAAATCAAAAGTATTGGTTGAGGAGCAGCAGACTGATACAACTCGTGGTAGTCAACAACCCAGTGAACCCATGACAAGGCTTAATGGGCAGAAGGAGTCATCATCAGTTGGCAGTTTATCTAATCCGAATAGAGAGGATGGGGGTGCTGTGAGCAAGCAACGCAAGAAAACTTCTAAGTTCGTCCGAGTCCGCCTTGGTGATGGTTCTGCGGAAGCACTTTTAGACTTCAAAAATCCAAATATTGATTCAGATACTGGATCAACTGATAACGTTGAAAGTAACAATAATGACCCCGGGGGCCTTCCCGTGCGAGGTGTTTGGCGAAATGGTGGAGGTCAAAAACTCTTCTCCta 2522 0.4366 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICEDRRCCICKTECNVVFVTKALGDYTRMINDFSALPSDVREGNVGSYWYHEDTNAYFDDVDHYKMIKAMCRLSCSVCDKMEEQPQDASKRRQRFRNIEQLKGHLFHRHRLLMCRLCLEGRKVFICEQKLYTRAQLNRHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSREHYTCHICQRLHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNTVEHGGRMSRSKRNAALQIPTSFRYRHSNEQDQRRARGRSFHRDFSESQLSLAIEASLETSNAEGALHDTSTSSNVDHGNIDVDPIIQPFESLSTTGSETSSRYLQALGHNSKNAPLEDSSFPPLSMGSSNNQQKLKHDSEGSSSNTMAARLRQHSNSKTSVLNSGAHGWPVASRGHLQLSSNSTQSRPSPNTVSGVSRNSGQMKTALNSGPAPSTYASSIQATHRTHEHISPGPSRDLHDNGRIVHSASAPNLSERGPGEPSISDFPPVSAVQVSKLPASSQSALNVEDVHTANKSLVEKIRSALEFDKDRYAIFKEISAQYRQGLIDTLAYLDYVEQFGLSHLVLDLARLCPDPLKQKELIDSYNARMQRNSPIEKGWGRGKGKSVVSNVSKKGKGKSVNAEESNPKDKLADSFLSTVRQLQSNCKASEEGSDVLSRGDYRTTKGKSKVLVEEQQTDTTRGSQQPSEPMTRLNGQKESSSVGSLSNPNREDGGAVSKQRKKTSKFVRVRLGDGSAEALLDFKNPNIDSDTGSTDNVESNNNDPGGLPVRGVWRNGGGQKLFS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03117 840 PANTHER ZINC FINGER PROTEIN 598 1 839 IPR044288 GO:0061630|GO:0072344
Bva13g03117 840 MobiDBLite consensus disorder prediction 798 840 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 732 770 - -
Bva13g03117 840 CDD RING-HC_ZNF598 5 46 IPR041888 -
Bva13g03117 840 PANTHER EBR1 1 839 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 388 443 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 388 519 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 452 505 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 650 689 - -
Bva13g03117 840 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Bva13g03117 840 MobiDBLite consensus disorder prediction 703 786 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 710 731 - -
Bva13g03117 840 MobiDBLite consensus disorder prediction 803 820 - -
Bva13g03117 840 SMART c2h2final6 251 280 IPR013087 -
Bva13g03117 840 SMART c2h2final6 220 250 IPR013087 -
Bva13g03117 840 SMART c2h2final6 108 144 IPR013087 -
Bva13g03117 840 SMART c2h2final6 196 219 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03117 Bva-Chr13 21923774 21928656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03117 1 840 C2H2 Transcription Factor Family AT3G62240 53.563 0.0 845
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03117 13 21923774 21928656 Bva13g03117 13 21923774 21928656 ECH