Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03104 atGGTGGCAGAAGCAGACCTTGTTTGTCAACAGAACATCCCGGTGTTGGATATGCAATATTTAGCTAAAGGAAGCAGCAAAATTCGTGAAACTGAAGACGCGTCTCTGGGGACGCCTTCAAGTTTTGAACGAGTTTGTGCTTCTGAATTAGTCTCTGCCGAGTCATTGTCTTCCCAAGAAGATGTTAGACCCGTGGATAGATTCTCAGATGCTGCTCTTGACTCTACTCTACAATATGTCCCCAACATCCGGTCTAGTAGTTTTGCTGACATTGGACCGCGCAGATACATGGAAGATGAACATATAAGGATAGATGATCTGTCTTCACACCTGGGATCATTATACGAATTTCCTAAACCAAGTGCCTTTTATgggGTATTTGATGGTCATGGAGGACCAGAAGCTGCGGCTTATATTAGGAAAAATGTGATGAGGCTCTTTTTTGAAGATGTCAGTTTCCCCCAGACATCCGAAGTTGATATTGTTTTCTTGCAAGAGGTAGAGAGTTCCCTCAGGAGGGCATATCTTTTGGCTGACTCAGCTTTGGCTGATGATTGCAGTGTGAGCAGCTCATCAGGGACCACGGCTCTGACTGCTTTGATTCTTGGCAGGCTTCTTATGGTGGCTAATGCCGGTGATTGTCGAGCAGTTCTTTGCCGTAAAGGAGAGGCAATTGACATGTCTCAAGATCACAGGCCCATTTACCCATCAGAGCGGAAGCGAGTTGAAGAATTGGGTGGCTTCGTAGATGATGGTTATCTAAATGGGGTTTTATCAGTAACTCGAGCACTTGGGGACTGGGATATGAAGTTCCCTCGGGGTTCTTCCTCACCGCTGATTGCAGAGCCGGAGTTCCGCCAAGTAATTCTTACAGAGGATGATGAATTCCTCATTATAGGATGTGATGGGATTTGGGATGTGATGTCAAGTCAGCATGCAGTGAGCCTTGTTCGTAGAGGCCTAAGGCGGCACGATGACCCGGAGCAGTGTGCCAGGGACCTAGTCATGGAGGCATTACGACTCAACACATTTGACAATCTTACCGTCATTATTGTGTGCTTATCTTCCATTGATCAGAGGGACCCTTCCCCACCTCGACAACGCAAGTTGAAGTGTTGTAGCCTCTCTGCTGAGGCTCTTTGTAGCTTGAGGACTTTGTTGGAAGGCAGCGCCAGCAACTG 1181 0.4691 MVAEADLVCQQNIPVLDMQYLAKGSSKIRETEDASLGTPSSFERVCASELVSAESLSSQEDVRPVDRFSDAALDSTLQYVPNIRSSSFADIGPRRYMEDEHIRIDDLSSHLGSLYEFPKPSAFYGVFDGHGGPEAAAYIRKNVMRLFFEDVSFPQTSEVDIVFLQEVESSLRRAYLLADSALADDCSVSSSSGTTALTALILGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERKRVEELGGFVDDGYLNGVLSVTRALGDWDMKFPRGSSSPLIAEPEFRQVILTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEQCARDLVMEALRLNTFDNLTVIIVCLSSIDQRDPSPPRQRKLKCCSLSAEALCSLRTLLEGSASN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03104 393 SMART PP2C_4 74 352 IPR001932 -
Bva13g03104 393 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Bva13g03104 393 SUPERFAMILY PP2C-like 76 356 IPR036457 -
Bva13g03104 393 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Bva13g03104 393 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 373 - -
Bva13g03104 393 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Bva13g03104 393 SMART PP2C_SIG_2 99 354 IPR001932 -
Bva13g03104 393 Gene3D - 71 361 IPR036457 -
Bva13g03104 393 CDD PP2Cc 83 354 IPR001932 -
Bva13g03104 393 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03104 Bva-Chr13 21888722 21891439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03104 97 389 PP2C-type Phosphatase Gene Family AT3G62260 71.186 5.67e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03104 K14803 - gmx:100819791 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03104 13 21888722 21891439 Bva13g03104 13 21888722 21891439 ECH