Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03093 ATGGAGTATTCGGGTGTTAATTATGATCATATGATGACAAGTTTATCAGACTGTGGTTCACCGTATGGAAGTGAAGAAGAGATGGTCATAAAGAAAGGTCCTTGGACAGAGGAAGAggattctcttctcttcaactACATCACTGCCCACGGCGAAGGTCACTGGAACTCCGTCGCTCGTTTTGCCGGTCTGAAGAGAACCGGCAAAAGCTGCAGATTAAGATGGTTAAACTACTTGCGTCCCAATGTTCGACGCGGTAATATCACCCTTCAAGAACAGCTCTTGATTCTTGATCTCCATTGCCGCTGGGGCAACCGGTGGTCGAAAATAGCGCAGTACTTGCCGGGGAGAACTGACAATGAGATCAAGAACTATTGGAGAACCAGAGTGGTAAAGCAGGCGAAGCAGCTCAAATGTGACGTCAATAGCAAACAGTTCAGAGATGCTTTGCGCTTCGTATGGATGCCCCGTTTGATCGAGCGGATCCAGGCATCTTCCCAGTCGGATTCTAACACCAACCCCACTTTCTTCGCTTCACCACATGTCCAAGCTTCTTCCATCTCGGACTCTGCCATATCTTATAACTCTTACGATTTAATAAGTGGCGGCGGCAGCGGTAGCTGCTCCAGTACTAGTGCAGAAAACGGGTATGGATCCGGTTTAAGTTCTGGTTCAAATCAGCATGTGGAGTCGGATATCCAACCATTGGAGCAGGTTGGGAATGGTTTTGGCGAAGCAGACTTGTGGACTGACGAAAACATTTGGTTCTTGCAACAACAACTGGCTGATCACTG 794 0.4673 MEYSGVNYDHMMTSLSDCGSPYGSEEEMVIKKGPWTEEEDSLLFNYITAHGEGHWNSVARFAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHCRWGNRWSKIAQYLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDALRFVWMPRLIERIQASSQSDSNTNPTFFASPHVQASSISDSAISYNSYDLISGGGSGSCSSTSAENGYGSGLSSGSNQHVESDIQPLEQVGNGFGEADLWTDENIWFLQQQLADH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03093 264 Gene3D - 31 84 - -
Bva13g03093 264 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Bva13g03093 264 SUPERFAMILY Homeodomain-like 30 126 IPR009057 -
Bva13g03093 264 PANTHER - 25 235 - -
Bva13g03093 264 CDD SANT 89 128 IPR001005 -
Bva13g03093 264 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Bva13g03093 264 Gene3D - 88 150 - -
Bva13g03093 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 83 IPR017930 -
Bva13g03093 264 CDD SANT 34 79 IPR001005 -
Bva13g03093 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 134 IPR017930 -
Bva13g03093 264 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Bva13g03093 264 Pfam Myb-like DNA-binding domain 85 128 IPR001005 -
Bva13g03093 264 SMART sant 84 132 IPR001005 -
Bva13g03093 264 SMART sant 31 81 IPR001005 -
Bva13g03093 264 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 25 235 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03093 Bva-Chr13 21831364 21832578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03093 25 262 MYB Transcription Factor Family AT2G47190 47.566 3.85e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03093 Myb_DNA-binding 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03093 K09422 - gmx:547458 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03093 13 21831364 21832578 Bva13g03093 13 21831364 21832578 ECH