Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03090 ATGGATGCCAAGGACATCCTAGGATTGTCCAGAACGTCCTTGCCTACCCAAGAGAAGAAGACCCGACCCCAGAAGGACTCGCAGAGAAAACCAGATGGCATTTCGCGGGAGGTGTATGCGCTTACAGGTGGTTTGGCACCTCTTATGCCTGCTGTTGATCCGTCccaattgaaaaagaagcCTCCACCTGACGAGAAGATCACGTGGCAATGGCTTTCTTTCACCAATTCTGCTCGCAAAGACAATCTCCAGCTTTACCACTggGTTCGCGTTGTTAATGGTGTTCCACCAACTGGCGATTATTCTTTTGCCAAGTATAACAAGTCTATTGACATTATCAAATACACAGATGAGGAGTACGAAAAGTATTTGAAAGATCCTGTGTGGACCAAGGAGGAGACCGATCAGCTTTTTGACTTGTGCGAAAGGTTTGATCTCCGATTTGTTGTTATAGCCGATAGATTCCCATCATCTCGGACTCTAGAGCAATTGAAGGATCGATACTACAGTGCGTGTCGAGCATTAATACTTGCTAGGGCTGCATCTCCTACGGACGTTGCAAATCATCCTCTTGTTAAGGAACCATATAATGTTGCACAAGAGATAGAGCGGAAACGAGCACTGTCCATGTACCTCTCTCTAACAAAGCAACAAGATCGCAAAGATGTAGAGGTTCTTGCTGAAGCGAAAAGAATATCTGAATCACGTGCTCCTGCGAAGGTTGCTGAGGAGCCTGAGTTAGCTGTTGCGGCAAATGCTGCTGCTGAAGTTACAGAGAGGGCTATACATGGTGATACTCCATCAAATGTTCAGCTTCCATCAACAGTTGTGCCTTCCGCGTTAACCGCAGATAATGCGTCTACTCTTGCTTCTCTTCGCATGCTTCGTGTGTATCTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCAAGCTCATCTGCTGGACTTCGGACTATCAAGCGGGTCGAGCAAACTTTGCAAGAACTTGGGGTTAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGCGCAGAGCATCttgaattaagaaaagaaatactaaCTCTGCTAAATCTTCAAAAACAGCTGCAATATAAGGAAGCCGAAGGTTCATCTTTTCGTGATGGTTCATATACTGAAACACCAGGCACCCCAAAGGATTGGACCTTTGTACCAGACTCGATGAGTTTTGGAGGTGAAAGGGTTGGCAAGAGGGAACAAAAACGCAAGGCTCCCGGACGGCTATCAGAAGCTCCATCGTCGCCAGCTCAGTCTAAAAGACCCAGAAAACTAAAGACCTCGGATTTATA 1313 0.4501 MDAKDILGLSRTSLPTQEKKTRPQKDSQRKPDGISREVYALTGGLAPLMPAVDPSQLKKKPPPDEKITWQWLSFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSIDIIKYTDEEYEKYLKDPVWTKEETDQLFDLCERFDLRFVVIADRFPSSRTLEQLKDRYYSACRALILARAASPTDVANHPLVKEPYNVAQEIERKRALSMYLSLTKQQDRKDVEVLAEAKRISESRAPAKVAEEPELAVAANAAAEVTERAIHGDTPSNVQLPSTVVPSALTADNASTLASLRMLRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFRDGSYTETPGTPKDWTFVPDSMSFGGERVGKREQKRKAPGRLSEAPSSPAQSKRPRKLKTSDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03090 437 MobiDBLite consensus disorder prediction 18 33 - -
Bva13g03090 437 MobiDBLite consensus disorder prediction 371 437 - -
Bva13g03090 437 CDD SANT_DMAP1_like 129 172 - -
Bva13g03090 437 MobiDBLite consensus disorder prediction 1 36 - -
Bva13g03090 437 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 313 377 IPR008468 GO:0005634|GO:0045892
Bva13g03090 437 SUPERFAMILY Homeodomain-like 125 177 IPR009057 -
Bva13g03090 437 SMART sant 125 174 IPR001005 -
Bva13g03090 437 PANTHER BNAA04G26950D PROTEIN 2 437 - -
Bva13g03090 437 Gene3D - 98 185 - -
Bva13g03090 437 Pfam SANT/Myb-like domain of DAMP1 101 176 IPR032563 -
Bva13g03090 437 MobiDBLite consensus disorder prediction 400 414 - -
Bva13g03090 437 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 437 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03090 Bva-Chr13 21810985 21816668 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g03090 DMAP1 5.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03090 K11324 - qsu:112038673 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03090 13 21810985 21816668 Bva13g03090 13 21810985 21816668 ECH