Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03081 atggagAAGAAGGAGATGCTGGCTGTGAAGACCGAGGATGCAGTTGGATCCTCTTCATTTCCTACTAGTTTTAATAGCTCAAACAGTTATCCATTCTCAAGCGTATTTGATTTCGGTGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTATGCAAGAGTTTAGTCCTCTGATTGATTTGCCTCGAGACTCAACTGTGGCTTCCTCTGCTCCCAAAGATCTATCAGAGACTGCAAAAGAGTGTTCGGAAGTGTTGAATCAGCCGCCTGCTACTCCAAACTCTTCATCGATTTCATCTGCGTCCAGTGAGGCACTGAATGATGATCAGAATaaaggggaagaagaagaacaccAAAAGACCAAGAAACTTCAGTTGAAAGCTAAGAAGACAAATCagaagagacagagagagcCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAGAAAGCTGTTAAAAACAGCCCCTTTCCCaggagcTACTATCGTTGCACCAGTGTATCATGTAATGTGAAGAAACGAGTGGAGCGATCTTTTAATGATCCAAGCGTTGTAGTGACAACCTACGAAGGCCAACACACACATCCGAGCTCAGTTATGCCTCGTTCAACCCTTGTCGGCGCTTCATTACCACCTGGTATCTCCGCTGGGAGCGCCACCACCTTTGGTTCATTACTGCCAGGAAACCTATCTCAGTATCAACAACAGCACCATCAACAGCAACAACTCCTTCTTAATACATTGTCATCTTTGGGTTTTCCTTACATTAATGATTCGACTTCGAAGAACATTGCTTTCCCTCAAGAAAGACGGCTTTGTAATGCAGGGTCGACAGCGGCTTTCTTAAGCGACAATGGGCTTCTTCAAGACATTGTTCCCTCTCATATGTTGAAAGAAGAGTA 950 0.4232 MEKKEMLAVKTEDAVGSSSFPTSFNSSNSYPFSSVFDFGEVEKSSLGFMELLGMQEFSPLIDLPRDSTVASSAPKDLSETAKECSEVLNQPPATPNSSSISSASSEALNDDQNKGEEEEHQKTKKLQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFNDPSVVVTTYEGQHTHPSSVMPRSTLVGASLPPGISAGSATTFGSLLPGNLSQYQQQHHQQQQLLLNTLSSLGFPYINDSTSKNIAFPQERRLCNAGSTAAFLSDNGLLQDIVPSHMLKEE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03081 316 PANTHER WRKY TRANSCRIPTION FACTOR 1 307 - -
Bva13g03081 316 MobiDBLite consensus disorder prediction 110 125 - -
Bva13g03081 316 PIRSF WRKY_txn_fact_IIc 1 316 IPR017396 GO:0003700
Bva13g03081 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 307 IPR044810 GO:0003700
Bva13g03081 316 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03081 316 MobiDBLite consensus disorder prediction 83 109 - -
Bva13g03081 316 Gene3D WRKY domain 141 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g03081 316 MobiDBLite consensus disorder prediction 1 28 - -
Bva13g03081 316 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03081 316 MobiDBLite consensus disorder prediction 65 140 - -
Bva13g03081 316 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03081 316 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03081 Bva-Chr13 21768558 21770564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03081 30 316 WRKY Transcription Factor Family AT2G47260 47.917 8.45e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva13g03081 WRKY 2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03081 - - aprc:113872234 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03113 04 25662876 25664732 Bva13g03081 13 21768558 21770564 BWGD
Bva13g03081 13 21768558 21770564 Bva13g03081 13 21768558 21770564 ECH