Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03072 ATGTCGGTGCTCACAGTGTCAATCTCCATAgATACAAACAACGCAGGTTTGTTGATGAAGGGTCAACATTTGCTGTTGAAATGGTTGCTTGCAATGTCTTGCCTGGTATTTATTGCTGATGTCGGTGCGTATTGTAAAGCAATAGTAGCCCCATATGTATCTCCCGCTAGACCACCAATGGCTCCTATTGTTGTTCGTGATCTACCACTTCCAGCAAACCTCCCAGTTTCCTATAGACATTGGTGGAAGCATTTTCCATCACCTGGTGTTCCAGCAGAGTCGCCAACCCATCCTCCTTCATCCGGTCATCTCATAAGTGCTGGTCAACCCCCTGCAAGTTCACGTTTATCCAAATCATTTATGAAGAAGAGTGAATTAAGATCTCCAAATCCTGGTTTTAAAGATATAGCCCCAACACATTCTACTTCTGGTGCGATTCCTTCTGGTTTGGCTCAGCCACCACTGTCCCCTTATGTTTCCAATTGTTGCAAACCTGACACAGTCTTGAAGAGAGGGAGTAACGATTGCCAATGTGTGTATCCCATAAAGCTGGACCTTCTCCTATTAAATGTCTCGCAAAATCCTAATTGGAATGTTTTTCTCGTACAATTAGCTACACAACTTCAGTTGCAGACCGATCAGATAGAACTGATCAACTTCTATGTACTCAGCTTAACGACATTAAATATATCGATGGATATTACTCCTCATAAAGAGATCAGTTTCTCTGCCATTGAAGCATCTCAAATAAACTCATCACTTTCAATGCACAAGGTTCATCTGGACCCTAAATTAGTAGGTGACTACAAGCTTCTCAATTTAACTTGGTTTAAGCCTCCACCAGCTTCTCAAGCTCCTGATATCTCTGCATCACCCTTAAAAGCTCCTTTGTATAGTTCACCAACTTCTACATCACCGAGTGCTTCAAATAGGGGGAGAcattctaatttatttcttattcttggAATTGGTGCTGGCATACTCTTTGTTGCTATTGTATCTATCTTTATACTCTGTTTATGCACGTTACAACACAAGAAAAGGCCATACCCCGTCGAAACTGAAAAGCCAAGGACGGAAACTACAGTTTCAGCTGTGGGATCTCTCCCCCACCCAACCAGTACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAAcaaacaactttgaagctgccAGCGTGCTTGGAGAAGGTGGGTTTGGCAGAGTTTTTAAGGGGGTCTTAAATGATGGTACTCCTGTGGCAATTAAGAGGCTTACAAACGGATGGCAACAAGGAGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCAGGTTGCACCATCGTAACCTTGTAAAACTGGTGGGATACTATAGTAATATTGAGTCATCCCAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCCTGGCTTCATGGCCCCTTGGGAATAAATTGCCCTTTGGATTGGGACACTAGAATGAAGATTGCGCTTGATGCTGCTAGAGGACTTGCATACCTGCATGAGGACTCGCAGCCCGGTGTTATACACAGAGATTTCAAGGCCTCCAACATACTGCTTGAGAATAACTTCCATGCTAAAGTTGCAGATTTTGGACTTGCTAAACAGGCACCCGAAGGCAGAGCCAATTACTTGTCTACCCGTGTCATGGGCACATTTGGGTATGTAGCTCCAGAGTATGCCATGACTGGGCACCTACTTGTTAAAAGTGATGTGTACAGCTATGGAGTTGTCTTGCTGGAACTGCTAACTGGAAGGAAACCTGTGGATATGTCACAGCCAGCTGGACAGGAAAACCTTGTCACTTGGGCAAGGCCCATACTTAGAGATAAGGATCGATTGGAAGAGCTTGCTGATCCGAGGCTCGGGGGAAAGTACCCAAAGGAAGACTTTGTCCGTGTTTGCACAATTGCTGCAGCTTGTGTTGCTCCTGAAGCAAGTCAACGACCCACAATAGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATAACAGAATATCAGGAATCCATGGTAGCCTCCTCCAATACACGGCCTAATCTAAGACAATCCTCTACCACCTTTGAGTCAGATGGGACATCTTCAATATTCTCTTCGGGTCCGTACTCTGGTCTTAGTGCCTTGGAACATGACAACATATCTCGAACAGCAGTTTTCTCTGAAGATCTTCATGAAGGGCGATG 2204 0.4338 MSVLTVSISIDTNNAGLLMKGQHLLLKWLLAMSCLVFIADVGAYCKAIVAPYVSPARPPMAPIVVRDLPLPANLPVSYRHWWKHFPSPGVPAESPTHPPSSGHLISAGQPPASSRLSKSFMKKSELRSPNPGFKDIAPTHSTSGAIPSGLAQPPLSPYVSNCCKPDTVLKRGSNDCQCVYPIKLDLLLLNVSQNPNWNVFLVQLATQLQLQTDQIELINFYVLSLTTLNISMDITPHKEISFSAIEASQINSSLSMHKVHLDPKLVGDYKLLNLTWFKPPPASQAPDISASPLKAPLYSSPTSTSPSASNRGRHSNLFLILGIGAGILFVAIVSIFILCLCTLQHKKRPYPVETEKPRTETTVSAVGSLPHPTSTRFIAYEELKEATNNFEAASVLGEGGFGRVFKGVLNDGTPVAIKRLTNGWQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNIESSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPGVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTIGEVVQSLKMVQRITEYQESMVASSNTRPNLRQSSTTFESDGTSSIFSSGPYSGLSALEHDNISRTAVFSEDLHEGR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03072 734 MobiDBLite consensus disorder prediction 90 139 - -
Bva13g03072 734 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 17 734 - -
Bva13g03072 734 SUPERFAMILY Protein kinase-like (PK-like) 366 667 IPR011009 -
Bva13g03072 734 PANTHER OS01G0750732 PROTEIN 17 734 - -
Bva13g03072 734 Gene3D Phosphorylase Kinase; domain 1 353 467 - -
Bva13g03072 734 CDD STKc_IRAK 396 666 - -
Bva13g03072 734 MobiDBLite consensus disorder prediction 99 119 - -
Bva13g03072 734 Pfam Protein tyrosine and serine/threonine kinase 393 665 IPR001245 GO:0004672|GO:0006468
Bva13g03072 734 ProSiteProfiles Protein kinase domain profile. 390 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g03072 734 MobiDBLite consensus disorder prediction 678 702 - -
Bva13g03072 734 Gene3D Transferase(Phosphotransferase) domain 1 468 689 - -
Bva13g03072 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Bva13g03072 734 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03072 Bva-Chr13 21718579 21724303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03072 1 734 Receptor kinase-like Gene Family AT4G02010 66.304 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva13g03072 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03072 - - gmx:100775615 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02717 04 23723270 23728595 Bva13g03072 13 21718579 21724303 BWGD
Bva04g03103 04 25596147 25601467 Bva13g03072 13 21718579 21724303 BWGD
Bva13g03072 13 21718579 21724303 Bva13g03072 13 21718579 21724303 ECH