Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03066 ATGGATGACACTACTTCGCCTGCACTCGAGTCAGAGGTTTCTTCAGTGCTCAAACCAGAAAATCAAGCTTCCAAAAAACGGAAAACGGTTCAGAAAACAGTTGTCAAGGTGAGAATTGGAGAAAATGTTAGCAAACTGAAGAACGAAGGGCTACCTTCTGATCTTTGGTCTTGGAGGAAATATGGACAAAAACCCATCAAAGGATCTCCTTATCCAAGGGGCTATTACAGGTGCAGCACATCCAAGGGCTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCATTACTTATACCTCAACCCATAACCATCCATCTCCTGATCTCCCCTCTACCACCAATTCTACCCAACAACCAAAAGAAGAACCTCAAACTCAAACCACTGAAGATCTCCCAACTACCacgaaggaagaagaagaagaagaagaaaaagaggatcATAAACCCACCGTGGCCAGTGATCAGTGTGCAAATCAAGAGAATTTTCATTACTTGTCATCACCAATGCGCTGTGCTGAAGACGTTGCAATTGACCAAGAAGATCCTTTCAAATTGAACATAGAGAAAACCCATGACAGAATAGATCTCTTGTTAGAGGAAGAACCCCTCTATTTCTCCCAGTTCAAGAACTTGTCCACGCCCAAATCAGAAGAACTTGATTTCTTTGACGAGCTTGAAGAGCTGCCCATACCTTCATCTTTCTTCAACTTCATGAGGAGTAATTTTTCCGATGAAAGGATTTCTGTGGCACCTTCTTG 776 0.4085 MDDTTSPALESEVSSVLKPENQASKKRKTVQKTVVKVRIGENVSKLKNEGLPSDLWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPSPDLPSTTNSTQQPKEEPQTQTTEDLPTTTKEEEEEEEKEDHKPTVASDQCANQENFHYLSSPMRCAEDVAIDQEDPFKLNIEKTHDRIDLLLEEEPLYFSQFKNLSTPKSEELDFFDELEELPIPSSFFNFMRSNFSDERISVAPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03066 258 SUPERFAMILY WRKY DNA-binding domain 49 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g03066 258 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03066 258 MobiDBLite consensus disorder prediction 106 137 - -
Bva13g03066 258 MobiDBLite consensus disorder prediction 1 20 - -
Bva13g03066 258 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03066 258 MobiDBLite consensus disorder prediction 1 31 - -
Bva13g03066 258 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 17 243 - -
Bva13g03066 258 Gene3D WRKY domain 37 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva13g03066 258 MobiDBLite consensus disorder prediction 106 163 - -
Bva13g03066 258 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva13g03066 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 243 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03066 Bva-Chr13 21699593 21700857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03066 8 240 WRKY Transcription Factor Family AT4G01250 40.171 3.10e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva13g03066 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03066 - - gmx:100127368 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03066 13 21699593 21700857 Bva13g03066 13 21699593 21700857 ECH