Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva13g03066 | ATGGATGACACTACTTCGCCTGCACTCGAGTCAGAGGTTTCTTCAGTGCTCAAACCAGAAAATCAAGCTTCCAAAAAACGGAAAACGGTTCAGAAAACAGTTGTCAAGGTGAGAATTGGAGAAAATGTTAGCAAACTGAAGAACGAAGGGCTACCTTCTGATCTTTGGTCTTGGAGGAAATATGGACAAAAACCCATCAAAGGATCTCCTTATCCAAGGGGCTATTACAGGTGCAGCACATCCAAGGGCTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCATTACTTATACCTCAACCCATAACCATCCATCTCCTGATCTCCCCTCTACCACCAATTCTACCCAACAACCAAAAGAAGAACCTCAAACTCAAACCACTGAAGATCTCCCAACTACCacgaaggaagaagaagaagaagaagaaaaagaggatcATAAACCCACCGTGGCCAGTGATCAGTGTGCAAATCAAGAGAATTTTCATTACTTGTCATCACCAATGCGCTGTGCTGAAGACGTTGCAATTGACCAAGAAGATCCTTTCAAATTGAACATAGAGAAAACCCATGACAGAATAGATCTCTTGTTAGAGGAAGAACCCCTCTATTTCTCCCAGTTCAAGAACTTGTCCACGCCCAAATCAGAAGAACTTGATTTCTTTGACGAGCTTGAAGAGCTGCCCATACCTTCATCTTTCTTCAACTTCATGAGGAGTAATTTTTCCGATGAAAGGATTTCTGTGGCACCTTCTTG | 776 | 0.4085 | MDDTTSPALESEVSSVLKPENQASKKRKTVQKTVVKVRIGENVSKLKNEGLPSDLWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPSPDLPSTTNSTQQPKEEPQTQTTEDLPTTTKEEEEEEEKEDHKPTVASDQCANQENFHYLSSPMRCAEDVAIDQEDPFKLNIEKTHDRIDLLLEEEPLYFSQFKNLSTPKSEELDFFDELEELPIPSSFFNFMRSNFSDERISVAPS | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva13g03066 | 258 | SUPERFAMILY | WRKY DNA-binding domain | 49 | 113 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva13g03066 | 258 | Pfam | WRKY DNA -binding domain | 54 | 111 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva13g03066 | 258 | MobiDBLite | consensus disorder prediction | 106 | 137 | - | - | |
Bva13g03066 | 258 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bva13g03066 | 258 | ProSiteProfiles | WRKY domain profile. | 47 | 113 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva13g03066 | 258 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Bva13g03066 | 258 | PANTHER | WRKY TRANSCRIPTION FACTOR 69-RELATED | 17 | 243 | - | - | |
Bva13g03066 | 258 | Gene3D | WRKY domain | 37 | 114 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bva13g03066 | 258 | MobiDBLite | consensus disorder prediction | 106 | 163 | - | - | |
Bva13g03066 | 258 | SMART | WRKY_cls | 52 | 112 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bva13g03066 | 258 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 17 | 243 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva13g03066 | Bva-Chr13 | 21699593 | 21700857 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva13g03066 | 8 | 240 | WRKY Transcription Factor Family | AT4G01250 | 40.171 | 3.10e-39 | 136 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Bva13g03066 | WRKY | 1.3e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva13g03066 | - | - | gmx:100127368 | 315.849 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva13g03066 | 13 | 21699593 | 21700857 | Bva13g03066 | 13 | 21699593 | 21700857 | ECH |