Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03064 ATGCAATCAGATGATAATGCAGTTAGTCTCGTCGATGTTTATCTATACAAGCAACTTGTCCTGTCCGTGAATTGCTCGAATCTTTCTGCTGTTCCCAACATGACTAACGATCCTTTTTCCTTCACagctttcaatttcaatggAATCTATGGCGATTATGATTCCATACAAAAGAATGTCTTTTTTCAAGGAAAGCACAATTTGTCCGAAATGGATTTTCATGGAGAGTATGGTGATTCTCTCTCTAATTATGGTAAAGAAGACCAATTGATCAAAGGCCAGAATCAGCAGCAAAAGGATAAGGAACCCAAGTGTGATAACTTGCTAGAAGATTTGAGCTTCGACCCTCTTCTGCAACCTACACAACCAATTCAGCAAAGTCCAGGGCACAAGATTCAGGGGCCGACAAGTTCAGCACTTGGGGGACACAAACCACTGTCTTCGTACTTTGCATCCTTGGAGCTGCTAAGCAATTATGGAAGTAGGTGCAAGAAGCTAAAGGGACAAGAAACAAACAACGTGGGCATGAACAACGAGATAACTGCGGGTCGGCAGAAGTTATCAATCGTAGAATTGATTAGAATGGCTGGGGAAAGGTATGTGCAATTCTCTGCCAATTGTTACGATGATTTTTACATTCCCATGCACCCTTATGGTTTTGGCTCTTTTGGCACTGGCCTTTTATCTGAGGAAGAATCCAGAGAAGTTGAGCTTGCTCAGTTTCTTCTGGCTGCAGCTGAAAAAGTTGGGTGCCAACAATATGAACGTGCCAGTAGATTGCTTCTACACTGTCATCTGAATTCGTCAGCTCGGGCAAACCCAGTTCAAAGAGTCATCTTTTCCTTCGTTCAAGCACTTCGAGAGAGAATAGATAAAGAAACAGGAAGGTTCGCACCAAAGGGGtctgagaaaaatgaagaaaatgaactGATTAATAACTTGAGCACAAGCAAGGCCGTTATCTGTCACCAAAAAATTCCCTTCAATCAAGTAATGCAACTCACTGGTACACAAGCCATAGTCGAAAACGTGGCTTCTCAAACCAAAATCCATCTCATAGATCTTTGCATAAGAAGTGGGGTGCAATGCTCACCTCTGATGAAGGCACTGGCAGAGCGCGAGGAGAAACCCGTGGAGCTTCTGAAGATAACCGCTATTGGATACAGTAGGGAATCCAAGTTAGAGGAGAACAGGAAAAGATTAGCTAGTTTTGCTGAATCCTTGAACTTGCCCTTCTCATATAAAGTGATTCTTGTTAAGGATGCTGCGGAAATCAATGAAgatcaatttgaaattgaagaagatgaagctgTGGTTGTCTACTCTCCATATATACTCAGAACCATGGTAGCAAAGCCAGAGTGCTTGGAAAATTTGATGAGAGTACTGAGAAATATAAAGCCATCAATAATGATAGTGCTTGAGGTGGAAGCAAACCATAATTCACCCTCCTTTGTGAATCGCTTCATTGAAGCATTGTTCTCCTCCGCGGCATTTTTTGATTGCCTTGATGACTGTCTCAAAGATGAACCAGAGTCCAGAATGGCAGTGGAAATGATTTTGAATCAAGGGATACGAAACATTGTTGCAATGGAAAGCAAAGAGAGAACAGTTCGAGATGTGAAGATAGATGTTTGGAGAAAGTTCTTTGCAAGGTACAGAATGGTGGAAACTGAGTTTAGCGAAGCATCTATGTATCAAGCTAGCTTAGTCCTCAAACGGTTTGCCCATGGGAATTCTTGCAATATAGATAAAAATGGCAAGTGTCTTATACTTGGGTGGAAGGGGACCCCAATGCATTCTCTTTCAGCTTGGAGGTTCctctg 1826 0.4064 MTNDPFSFTAFNFNGIYGDYDSIQKNVFFQGKHNLSEMDFHGEYGDSLSNYGKEDQLIKGQNQQQKDKEPKCDNLLEDLSFDPLLQPTQPIQQSPGHKIQGPTSSALGGHKPLSSYFASLELLSNYGSRCKKLKGQETNNVGMNNEITAGRQKLSIVELIRMAGERYVQFSANCYDDFYIPMHPYGFGSFGTGLLSEEESREVELAQFLLAAAEKVGCQQYERASRLLLHCHLNSSARANPVQRVIFSFVQALRERIDKETGRFAPKGSEKNEENELINNLSTSKAVICHQKIPFNQVMQLTGTQAIVENVASQTKIHLIDLCIRSGVQCSPLMKALAEREEKPVELLKITAIGYSRESKLEENRKRLASFAESLNLPFSYKVILVKDAAEINEDQFEIEEDEAVVVYSPYILRTMVAKPECLENLMRVLRNIKPSIMIVLEVEANHNSPSFVNRFIEALFSSAAFFDCLDDCLKDEPESRMAVEMILNQGIRNIVAMESKERTVRDVKIDVWRKFFARYRMVETEFSEASMYQASLVLKRFAHGNSCNIDKNGKCLILGWKGTPMHSLSAWRFL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03064 575 Pfam GRAS domain family 206 573 IPR005202 -
Bva13g03064 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 573 IPR005202 -
Bva13g03064 575 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 52 573 - -
Bva13g03064 575 MobiDBLite consensus disorder prediction 86 101 - -
Bva13g03064 575 ProSiteProfiles GRAS family profile. 196 573 IPR005202 -
Bva13g03064 575 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03064 Bva-Chr13 21691651 21693651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03064 203 574 GRAS Transcription Factor Family AT1G66350 29.491 2.90e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva13g03064 GRAS 1.6e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03064 - - gmx:100791952 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03064 13 21691651 21693651 Bva13g03064 13 21691651 21693651 ECH