Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03063 ATGGTGTCCAAAGCATCCGATTTCGCAACCAAAACTAGAAAACCACAAGGGGAACCGGTAAACGATCCTGTTGGAACCTtgccaaacaaaataaatcagctgaaaaagaaaattcaggcGGAGAGAGCTGAATCAGTAAGGGAAAAACTTAAGAAGAATGGGAAGAAGTTACAGTGTCATATTTCATATATCATGTCAGAAATGTCAAGAAGGAAATCTTCACATAAAGATGAGGATAGCACTAGTCAAATGCTTTCTTCAAGAACTGATTTCCCCTTGTTCAAGTTCAATGGTTTCTCCCAAGGTTCGGGGGACAAAGACCTCCTTAACAATGTAGAAGAATCTACATCATCAAGTGTCATACTTccatatattgaaaaattaccTCGATATACATCTTGGATGTTTTTGGACAGAAATCAGAGAATGGCTGAAGACCAGTCAGTAGTTGGGAGAAGACAAATCTACTATGATCCACACGGAAGTGAAGCACTGCTATGCAGTGACAGTGAGGAGGAGTTAGCAGAACCGGAGGAAGAGAAACATGAATTTTCAGAGGGTGAAGATCGAGTTTTATGGATGGCGTTTGAGGAGCATGGGCCGACTGACCAAGTATTAGATATTGTGAGACAGTTTGTTAGGGGGACCAGTTTGGAAATCCAGGAGAGATATAAAAAcctcaagaaaaagaatggaGGCCAGGATGATCAAAGTTCTGGAGATTATGAAACTCGTATTGGCGTATGCATTGAGAAAAGTCTCGATGCTGCTTTGGATTCTTTTGATAACCTTTTCTGTCGCCGTTGCATGTTGTTTGACTGCCGTCTTCATGGCTGCTCCCAAGCTTTAATTTATCCTTGTGAAAAGCAGCCATCTTGGTCTGAACATGAAGAGGACAAGAGACCATGCAGTGATCAGTGCTACcttcaaTTAAAAGTTGTCAACAATTTGTTACAAGATTCAGTTTCTAGGTCTTTGCAGGATAAGAAAACCACAGTCATGGAAGAGGGAGTAATGACACTGGTATCCTCTGGTACGGAGGGGCCAGGTAATCAGAGTACTCCTACTATcttggaagaagaaaaatgcatgAGTGTAAAGACAACAACTTTTGCAACAGAAGTTGATTGTAGTGAATCTCTCAATTTAAATGTGCCTGTCTCAGAAAGTCCcagaaaaaggaagatgaCAAGTTACTCAAATACAGCACCATGTGACTCAACCTTGATTCTTGATGATTCTCAGAGCccttgtaaaaagaaaaagaaaatctcagaTACTGATGTAGTTACTGTAATTAGTGATGATGACATGGATCTAAATGATGGGGGATGTGACAAAAATAAACGCATAATCGCCAATGCATCTTTAAATGATTCTGATGGACATACttcaaataaattgatattttttgataGCACTTGCCATGGTGAACATGACAGAAGTGTTTGCAATGGACCAAAATATATGACAGATAAAACAGAATTAAAGCAGTCATCCAATCCAGTGGAAGGGCAGATAGAAGGTAAGCGAAGTCTGTTAGATTGGAAACCTTTGGAGAAAGAATTATACGCTAAGGGATTAGAGATGTTTGGGAGAAACAGTTGTCTCATAGCGAGGAACTTGCTTTCTGGGTTGAAGACTTGCTTAGAAGTAGCTAGATACATGCATGCTGGTGGAACGTCAATGCCACATGGATCTGTTATTTCACCAAGTTCTATCATGGATGACACTGGAAAGACTGATGTAGAGTGCATGAACCAGGAGATGCCAACAAGATCAAGGTTGCTGCGGAAAAAGGGTAAAACAAGgaagttaaaatattcttgGAAGTCTGCTGGCGTCCCATCAATCTGGAAAAGAATTGCTAATGGCAAAAACCGATCCTGCAAGCAGTACACACCATGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCTTGCCTTCATAGTGGAAGCTGCTGCGAAAAGTATTGCGGGTGTTCAAAAAGCTGCAAAAATCGGTTCAGGGGATGCCACTGTGCCAAGAGTCAATGCAGAAGTCGGCAATGCCCATGCTTTGCTGCTGGACGAGAATGTGACCCAGATGTTTGTCGAAATTGCTGGGTCAGCTGCGGAGATGGTACATTAGGGGAGCCACCTAGACGTGGAGATGGTCAGTGTGGAAATATGAGGCTTCTTTTAAGGCAACAGCAGAGGATTCTTTTAGCAAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTGAAGAACTCTGTTAACAAAAATGATTACCTAGGAGAATACACTGGTGAACTGATCTCCCACTATGAAGCAGATAAGCGTGGGAAAATATATGATCGTGCAAACTCGTCGTTTCTTTTTGACTTGAATGATCAGTATGTTCTAGATGCTTACCGTAGAGGAGACAAGCTGAAATTTGCAAACCACTCATCAAATCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTAGGCATCTTTGCCAAGGAAAATATTGAAGCTAGTGAGGAGATCTTCTATGATTATTGTTATGGTCCAGAACAAGCACCCATATGGGCTCGTAAACCTGGGGCTTCTAAAGGAGATGAATCATCAGTTCCTCAAGGCAGAGCGAAAAAACACCAGTCTCATGGATA 2648 0.395 MVSKASDFATKTRKPQGEPVNDPVGTLPNKINQLKKKIQAERAESVREKLKKNGKKLQCHISYIMSEMSRRKSSHKDEDSTSQMLSSRTDFPLFKFNGFSQGSGDKDLLNNVEESTSSSVILPYIEKLPRYTSWMFLDRNQRMAEDQSVVGRRQIYYDPHGSEALLCSDSEEELAEPEEEKHEFSEGEDRVLWMAFEEHGPTDQVLDIVRQFVRGTSLEIQERYKNLKKKNGGQDDQSSGDYETRIGVCIEKSLDAALDSFDNLFCRRCMLFDCRLHGCSQALIYPCEKQPSWSEHEEDKRPCSDQCYLQLKVVNNLLQDSVSRSLQDKKTTVMEEGVMTLVSSGTEGPGNQSTPTILEEEKCMSVKTTTFATEVDCSESLNLNVPVSESPRKRKMTSYSNTAPCDSTLILDDSQSPCKKKKKISDTDVVTVISDDDMDLNDGGCDKNKRIIANASLNDSDGHTSNKLIFFDSTCHGEHDRSVCNGPKYMTDKTELKQSSNPVEGQIEGKRSLLDWKPLEKELYAKGLEMFGRNSCLIARNLLSGLKTCLEVARYMHAGGTSMPHGSVISPSSIMDDTGKTDVECMNQEMPTRSRLLRKKGKTRKLKYSWKSAGVPSIWKRIANGKNRSCKQYTPCGCQSMCGKQCPCLHSGSCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVNKNDYLGEYTGELISHYEADKRGKIYDRANSSFLFDLNDQYVLDAYRRGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKENIEASEEIFYDYCYGPEQAPIWARKPGASKGDESSVPQGRAKKHQSHG 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03063 882 ProSiteProfiles CXC domain profile. 619 718 IPR026489 -
Bva13g03063 882 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 16 879 IPR045318 GO:0006338|GO:0018024
Bva13g03063 882 SMART CXC_2 667 704 IPR033467 -
Bva13g03063 882 Pfam CXC domain 671 702 IPR041355 -
Bva13g03063 882 Coils Coil 31 51 - -
Bva13g03063 882 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 16 879 - -
Bva13g03063 882 MobiDBLite consensus disorder prediction 1 31 - -
Bva13g03063 882 ProSiteProfiles SET domain profile. 732 847 IPR001214 GO:0005515
Bva13g03063 882 CDD SET_EZH 732 848 - -
Bva13g03063 882 SUPERFAMILY SET domain 632 850 IPR046341 -
Bva13g03063 882 Gene3D SET domain 633 848 IPR046341 -
Bva13g03063 882 Pfam SET domain 743 846 IPR001214 GO:0005515
Bva13g03063 882 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 882 IPR025778 GO:0031519
Bva13g03063 882 MobiDBLite consensus disorder prediction 858 882 - -
Bva13g03063 882 SMART set_7 732 853 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03063 Bva-Chr13 21682546 21690292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03063 721 850 C2H2 Transcription Factor Family AT2G23740 27.211 8.08e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva13g03063 SET 5.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03063 - - gmx:100808730 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03097 04 25570481 25577858 Bva13g03063 13 21682546 21690292 BWGD
Bva13g03063 13 21682546 21690292 Bva13g03063 13 21682546 21690292 ECH