Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03058 ATGGGTTCGATTCAAGGTCCAGCAAGCTCGGGATCCGATGGTGGGTCTCCTGTGATCGAtgagaggaagaggaagaggatgtTGTCGAACCGTGAATCGGCGAGGCGATCACGGATGAGGAAGCAGAAGCAACTGGAAGATCTGGCCGATGAAATCACGCGATTGCAAGGTGCCAACACTCAGCTAGTTCAGAACATAAAGGCTAAGGAGGAAGCATACATTGAGATTGAGTCCGCCACTAATATCCTGAGGGCTCAGACTACGGAGTTAACCGATCGATTGCGCTTTTTGAACTCGATCCTTGAGATCGCTGAAGAGGTCAGCGGGTTTTCTGTTGATATCCCTGAGATACCAGATCCACTCCTGGAACCGTGGCAAATTCCTCATCAAATACCGATCATGGCGTCCGCAGACATGCAAATGACCCTGCATTA 434 0.477 MGSIQGPASSGSDGGSPVIDERKRKRMLSNRESARRSRMRKQKQLEDLADEITRLQGANTQLVQNIKAKEEAYIEIESATNILRAQTTELTDRLRFLNSILEIAEEVSGFSVDIPEIPDPLLEPWQIPHQIPIMASADMQMTLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03058 144 Pfam bZIP transcription factor 22 73 IPR004827 GO:0003700|GO:0006355
Bva13g03058 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 141 - -
Bva13g03058 144 SUPERFAMILY Leucine zipper domain 22 73 IPR046347 GO:0003700|GO:0006355
Bva13g03058 144 Gene3D - 20 75 - -
Bva13g03058 144 Coils Coil 31 65 - -
Bva13g03058 144 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Bva13g03058 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Bva13g03058 144 MobiDBLite consensus disorder prediction 1 44 - -
Bva13g03058 144 MobiDBLite consensus disorder prediction 17 44 - -
Bva13g03058 144 CDD bZIP_plant_GBF1 23 73 IPR045314 GO:0003700|GO:0006355
Bva13g03058 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 83 IPR004827 GO:0003700|GO:0006355
Bva13g03058 144 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03058 Bva-Chr13 21662509 21664104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03058 1 139 bZIP Transcription Factor Family AT3G62420 57.343 2.42e-51 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva13g03058 bZIP_1 1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03058 K25786 - jre:108981706 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03093 04 25557055 25558284 Bva13g03058 13 21662509 21664104 BWGD
Bva13g03058 13 21662509 21664104 Bva13g03058 13 21662509 21664104 ECH