Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03054 ATGGCTAGGCATGTTGTCTATGTCCACCAAAATAAAGAATCTCCTGCGCTGGTATTCACTCCACTTGAACCATTTTTGCTCCGtGCATATATATCGGCTGCTAGAAGATTGTCTCCTAGTGTCCCAAGGGAACTGGAAGAGTATATCGCTAGTGCATACTCCAGCATTCGCCAAGAAGAAGCCAAGTCTAATACTCCTCATTCCTATACGACTGTCAGAACTTTGCTCAGCATTCTTCGCATATCACCAATGAGTGTTTCGCTGAGGCTAATGCAGATGTCTAAGTTCTCTTTGTACTCCGATGAGCGGCAAAGATCCGGTTTAGATGCCATATCTGATATCTATTCTATACTGCGAGATGAAGCTGCCCTGAGTAATAAGATGGACGTAAGCTATGCCCATGCTCTTAATTGGATATCTAGGAAGGGTTACAGCGAAGCCCAATTGAAAGAGTGTTTGGAGGAGTATGCAGCATTAAACGTATGGCAGATACATCCCCACACTTTCGGTATCCGATTTATTGATGCTTG 530 0.4396 MARHVVYVHQNKESPALVFTPLEPFLLRAYISAARRLSPSVPRELEEYIASAYSSIRQEEAKSNTPHSYTTVRTLLSILRISPMSVSLRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAALSNKMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFGIRFIDA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03054 176 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 154 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva13g03054 176 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 1 154 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva13g03054 176 Pfam MCM AAA-lid domain 26 90 IPR041562 -
Bva13g03054 176 Gene3D - 1 94 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03054 Bva-Chr13 21646231 21647621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03054 1 174 Core DNA Replication Machinery Family AT4G02060 75.132 8.80e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03054 K02210 - rcu:8267347 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03054 13 21646231 21647621 Bva13g03054 13 21646231 21647621 ECH