Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03053 ATGGTCAAACTGAAGGCGAAAATTCAAGAATTAGCTGAACATGTTCCAAAAGGCCATATTCCACGTACTATGACTGTTCATTTTAGAGGAGAGCTCACAAGAAAGGTAGCTCCAGGAGATGTGGTTGAACTATCTGGGATCTTTCTTCCTATTCCTTACACTGGTTATAGAGCGATGCGTGCTGGCCTAGTTGCCGATACTTACTTAGAGGCCATGTCTGTCAcccattttaagaaaaaatatgaagaATATGAACTTAGAGGAGATGAGGAAGAGCAAATTGCGCGGTTAGCAGAGGATGGGGatatttacaataaattagCAAGATCGCTTGCTCCTGAAATTTTTGGAAATGATGATATTAAAAAGGCTCTGCTGCTTCTCCTTATAGCCAAACTACTAATGTCAATCTTCACTTCACTACAGATTAGAGGAGACCTACATATATGTTTGATGGGTGATGCCGGTGTTGCTAAGAGTCAGCTCCCTAAACACATAATTAATGTAGCTCCCAGGGGGGTGTATACTACTGGCAGAGGAAGCAGTGTAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTGACAAATGAGATGGTTCTGGAAGGAGGAGCATTGGTTCTAGCAGATATGGGCATATGTGCCATTGATGAGTTTGACAAGATGGATGAATCAGATCGTACAGCTATACATGAAGTTATGGAACAGCAGACTGTTAGCATTGCCAAGGCTGGTATCACCACTTCATTGAATGCAAGAACTGCTCTCCGTCCTGCAGCTAATCCAGCATGGGGAAGATATGATCTGCGGAGAACTCCAGctgaaaatattaatgttcCTCCTGCCCTGCTATCAAGATTTGATTTGCTGTA 872 0.4106 MVKLKAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGYRAMRAGLVADTYLEAMSVTHFKKKYEEYELRGDEEEQIARLAEDGDIYNKLARSLAPEIFGNDDIKKALLLLLIAKLLMSIFTSLQIRGDLHICLMGDAGVAKSQLPKHIINVAPRGVYTTGRGSSVVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTALRPAANPAWGRYDLRRTPAENINVPPALLSRFDLL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03053 290 Gene3D - 88 290 IPR027417 -
Bva13g03053 290 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 5 290 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva13g03053 290 SUPERFAMILY Nucleic acid-binding proteins 6 71 IPR012340 -
Bva13g03053 290 ProSitePatterns MCM family signature. 212 220 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bva13g03053 290 ProSiteProfiles MCM family domain profile. 103 290 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 Pfam MCM OB domain 6 50 IPR033762 -
Bva13g03053 290 PRINTS Mini-chromosome maintenance (MCM) protein family signature 144 159 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 PRINTS Mini-chromosome maintenance (MCM) protein family signature 283 290 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 PRINTS Mini-chromosome maintenance (MCM) protein family signature 204 218 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 PRINTS Mini-chromosome maintenance (MCM) protein family signature 232 245 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 PRINTS Mini-chromosome maintenance (MCM) protein family signature 256 268 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 Pfam MCM P-loop domain 91 290 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 Gene3D - 3 81 IPR012340 -
Bva13g03053 290 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 5 290 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 SMART mcm 1 290 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva13g03053 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03053 Bva-Chr13 21645680 21651439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03053 5 290 Core DNA Replication Machinery Family AT4G02060 85.315 3.98e-178 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03053 K02210 - zju:107406058 500.745