Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03038 ATGGGAAGGGCACCTTGTTGTGAGAAAGTAGGGTTAAAGAAGGGGAGGTGGACGGCAGAGGAAGATGAAATCTTGATGAAGTACATTCAGGCCAATGGGGAAGGCTCTTGGAGGTCCTTACCCAAGAATGCAGGATTGCTGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATTAACTATTTGAGAGCTGACCTTAAAAGGGGCAACATTTCTCCTCAAGAGGAAGATGTCATCATAAAGTTGCATGCTTCTTTGGGCAACAGGTGGTCGTTAATTGCAAGTCACTTGCCAGGAAGAACGGACAACGAGATAAAGAACTACTGGAATTCTCACTTGAGCAGGAGAATAAATACTTTCAGGAGGGCAAATAGCAGCAGTGATAAGACCCCCATGATTACGGATGTTCATGTCCCTAAAGCGAGAAGTGATAATATTCCTCCCAAACGAAAAGGTGGTAAAACAAGCCGTTGGgctatgaataaaaataagagctACAGTACCCAAAACCAAAAGGAAACGGAGAAACCTAAAGAAAGTAGTGTCAGTACTGTGAATCATGAAGATGAGAATGAGAAGGAGGCAGTTCCAGTTCCATCCACCCCAGCACTAGAGAATGAAATCTTATCCACTAATGTAGAGGATTTCATGTCATTGGAAGCTGACCAAGAAGATCATAAGATCAGTGatgcaagagaaaaggaaagtagTACTGATCAAGGGTTTAGGTCCAGTAGTTGCAGCGAAGGCAGAGAGGGGATGCAGTTAGAGGAACAACACCCACTGGAGCACGAAGGCATTAATGGCGGTGAGGTGTTGTGTTTTATTGACACGTTGGACGTCCCTGATTGGTTGCTGGACGATGGAGGTGGAATTTGGCCCTTAACTGATGAAAGAGAGAGCAGTATtctgaataataaaaataataacgaCGACGTTGTCGGCGGTGGTACAGGTGAGGAAAGCGAGGTTGGTAGGCTTGGGACATGTCCTAACAAAATGGCGGCTAGTGAGGAGATGGAGAGAGTGAATCTGAGCTGCTCCAATGAGAAGAGGGAGATGAGCAGTGGGGATCAGTGGTTTTCTTGTTCTTCGATCAGTACGACGTCGGTTTTCGATGATAACAGCTGGGATTGGGAGAGTGCCTTGCAACTGGACAATATTGTTGATGAGTCTCAAGATGAGTACTCATGGGTggacaacaaagaaaaacttgtCTCTTGGCTATGGGAAGATGATCATGATTTGGAAAGTGATTCTCAGAACTTAGGAGACATAGATCCTGAGAAACATAGTGCTATGATTGCTTGGTTTCTTTCCTCAACTTG 1325 0.4257 MGRAPCCEKVGLKKGRWTAEEDEILMKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISPQEEDVIIKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRRINTFRRANSSSDKTPMITDVHVPKARSDNIPPKRKGGKTSRWAMNKNKSYSTQNQKETEKPKESSVSTVNHEDENEKEAVPVPSTPALENEILSTNVEDFMSLEADQEDHKISDAREKESSTDQGFRSSSCSEGREGMQLEEQHPLEHEGINGGEVLCFIDTLDVPDWLLDDGGGIWPLTDERESSILNNKNNNDDVVGGGTGEESEVGRLGTCPNKMAASEEMERVNLSCSNEKREMSSGDQWFSCSSISTTSVFDDNSWDWESALQLDNIVDESQDEYSWVDNKEKLVSWLWEDDHDLESDSQNLGDIDPEKHSAMIAWFLSST 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03038 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva13g03038 441 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 403 - -
Bva13g03038 441 MobiDBLite consensus disorder prediction 168 194 - -
Bva13g03038 441 CDD SANT 16 61 IPR001005 -
Bva13g03038 441 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva13g03038 441 MobiDBLite consensus disorder prediction 120 203 - -
Bva13g03038 441 MobiDBLite consensus disorder prediction 222 238 - -
Bva13g03038 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva13g03038 441 Gene3D - 70 135 - -
Bva13g03038 441 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva13g03038 441 MobiDBLite consensus disorder prediction 302 327 - -
Bva13g03038 441 CDD SANT 71 112 IPR001005 -
Bva13g03038 441 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva13g03038 441 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva13g03038 441 SMART sant 66 114 IPR001005 -
Bva13g03038 441 SMART sant 13 63 IPR001005 -
Bva13g03038 441 Gene3D - 11 67 - -
Bva13g03038 441 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva13g03038 441 MobiDBLite consensus disorder prediction 222 254 - -
Bva13g03038 441 PANTHER MYB TRANSCRIPTION FACTOR 2 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03038 Bva-Chr13 21575437 21577833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03038 1 178 MYB Transcription Factor Family AT5G49330 65.946 2.22e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g03038 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03038 K09422 - zju:107426233 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03076 04 25453479 25456811 Bva13g03038 13 21575437 21577833 BWGD
Bva13g03038 13 21575437 21577833 Bva13g03038 13 21575437 21577833 ECH