Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03015 ATGTCCAGCGAAGCTCATGCCCATAATTCAAAGGGGCTCCTTTGCAATGCTGGGGCCGGCGCAGCCGCCGGAGTTCTTGCTGCTACATTTGTGTGTCCTTTAGATGTTATTAAAACTAGGTTTCAGGTTCATGGGCTGCCACAGCTTGCTAGTGGAAGTGTTAAAGGCAGCCTTATAGTtggaagtttggaacaaataTTTCACAAGGAGGGGTTGCGTGGCATGTACCGTGGGCTGGCGCCCACTGTGCTTGCATTACTTCCAAACTGGGCGGTTTACTTTACAGTGTATGACCAGCTCAAGTGCCTTCTTTGCAATGGTGATGAAAGCCATCATCTTTCACTTGGAGCTAACATGATAGCTGCTTCTGGTGCTGGGGCTGCGACCACCATTGCTACTAATCCACTTTGGGTTGTCAAGACAAGACTCCAAACCCAGGGAACAAGAACAAGTGTTGTGCTATACAGGAGCACACTATCTGCTTTAAGGAGAATTTTTCACGAGGAAGGCATTCGGGGATTGTACAGTGGCCTTGTTCCTGCTCTGGCTGGTATCAGCCATGTTGCAATCCAATTTCCAACATACGAGacgataaaattttatttagctAATCAAGATAGCAAAGCAGTAGATAAACTTGGTGCACGCGATGTTGCCATTGCCTCATCAGTCTCCAAAATTTTTGCATCCACATTAACTTATCCTCACGAGGTTGTACGGTCTAGACTGCAAGAACAAGGACACCACTCTGAGAAGCGGTACTCTGGTGTAATTGACTGTGTTAGGAAAGTGTTTCAGCAAGAGGGCCTACCTGGATTTTATCGTGGGTGTGCCACAAACCTTCTGAGGACAACTCCAGCTGCTGCGATCACATTTACCAGTTTTGAAATGATACACCGGTTTCTTGTCTCGCTTTTCCCTCCTGATCCACAGCCACATATTTTGTG 947 0.4562 MSSEAHAHNSKGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPQLASGSVKGSLIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTVYDQLKCLLCNGDESHHLSLGANMIAASGAGAATTIATNPLWVVKTRLQTQGTRTSVVLYRSTLSALRRIFHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLANQDSKAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGLPGFYRGCATNLLRTTPAAAITFTSFEMIHRFLVSLFPPDPQPHIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Bva13g03015 315 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 1 314 - -
Bva13g03015 315 Gene3D Mitochondrial carrier domain 2 107 IPR023395 -
Bva13g03015 315 SUPERFAMILY Mitochondrial carrier 12 297 IPR023395 -
Bva13g03015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Bva13g03015 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 314 IPR044712 GO:0006862|GO:0055085
Bva13g03015 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Bva13g03015 315 Gene3D Mitochondrial carrier domain 108 304 IPR023395 -
Bva13g03015 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Bva13g03015 315 Pfam Mitochondrial carrier protein 13 105 IPR018108 -
Bva13g03015 315 Pfam Mitochondrial carrier protein 219 303 IPR018108 -
Bva13g03015 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Bva13g03015 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Bva13g03015 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Bva13g03015 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Bva13g03015 315 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03015 Bva-Chr13 21479725 21484219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03015 1 309 Chloroplast and Mitochondria Gene Families AT2G47490 77.346 2.54e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03015 K15115 - gmx:100500213 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03015 13 21479725 21484219 Bva13g03015 13 21479725 21484219 ECH