Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03014 ATGGCGGCAGAAGCGGCATTGTCGTTTTCCGTGGCATCCGTGGTGGAGGATGTGCTTCAACAGCAAAATCGGATGAAAGATCTTGATTTAGAATCTAGAAAAGCAGAAGAAGCTGCATCAAGAAGGTATGAAGCAGCAGGGTGGCTGAGAAAAATGGTGGGAGTTGTTGCAGCTAAAGATTTACCGGCAGAGCCCACTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGCGGAATTATCCTCTGTAATGTCATTAATAAGGTTCAACCCGGAGCTGTACCCAAGGTTGTGGAAAGTCCAGTTGATTCTGCACTTATACCAGATGGGGCTCCACTAACGGCATTTCAGTATTTTGAAAACGTGAGGAACTTTCTTGTGGCTGCCCAGGAAATTGGACTTCCTACTTTTGAAGCATCTGATCTGGAACAAGGAGGAAAATCAGCAAGGATAGTGAACAGCGTTTTGGCACTCAAATCCTATTGTGAATGGAAACAGTCCGGGGCAAATGGTGTGTGGAAGTTTGGTGGAAATCTTAAACCTGCAACTTCTGGAAAATCTTTTGTCAGAAAAAACTCGGAGCCATTTACTAATTCCTTGTCTAGGACGTCATCTATCAATGAAAAATCTCTGAATGCTTGTACCTCTGACGTTGAGCCTAATAAAATGTCTGGTTCTCATTCTTTGAGCATGCTTGTTCGTGCAATGCTATCAGATAAGAAGCCTGAAGAAGTTCCAATGCTGGTTGAATCCGTTTTAAATAAGGTTGTCGAGGAGTTTGAGCATCGCATTGCAACACAAGGTGAACAGACAAGAACAACTTCAAGAAACTTTGTTGTCTCTCAAGGCAACGGGTCTGTGTCAAAGTCTGCTTTGGTGGATAAGAAGGCGGAGAACAAGATCCCTACagttacaaagaaagaagaaaatgtacATAAACGCCGTTTTCTTGATGAGGAGCTTTTGAAACAGCAAATGCTTTTTGATCAACAGCAAAGAGATATTCAAGAACTAAAGCATACTATTCAAACCACAAAAGCTGGAATGCAGTTCATGCAGATGAAGTTTCATGAGGACTTTCATAATCTTGGAAAGCACGTCCACGACTTAGCTCATGCTGCTTCTGGATATCACAGAGTTCTTGAAGAAAATCGCAAGCTATATAATCAAGTGCAGGACCTTAAGGGAAGTATTAGGGTGTATTGTCGAGTAAGACCCTTCTTGTCTGCTCAATCAAACTATATGAGCACGGTGGAGCACATCGAAGAAGGAACTATCACAATTAATGTTCCATCTAAGAATGGCAAAGGACGCAGATCATTCAACTTCAACAAAGTCTTTGGACCATCTGCATCCCAAGCTGAGGTCTTTTCTGACATGCAGCCACTCATTAGGTCTGTTCTTGATGGTTATAACGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTTTACCATGACCGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCACTAAGCGATTTGTTTCTTATAGCAGATCAAAGAAAGGACACATTTCACTACGATGTGTCAGTTCAAATGATTGAGATTTATAACGAGCAAGTTAGAGATTTATTGGTAACTGATGGAACAAACAGAAGATATCCTTTTGCCAATCATTTTTCTAACAGAGGGTTAAGCGTACCAGATGCAAGCCTTGTCCCAGTATCATCAACATTTGATGTTATTGATCTAATGAACCTTGGACAAAGGAACCGTGCAGTTGGAGCAACGGCCCTTAATGACCGTAGTAGCCGGTCTCATAGTTGCTTGACGGTTCATATTCAAGGAAGAGATTTGACATCTGGAAGTATCCTTCGTGGGTGTATGCATCTGGTTGACTTGGCAGGGAGTGAGAGAGTAGACAAATCTGAGGCCACGGGAGACAGACTTAAAGAGGCACAGCATATTAACAAATCTCTCTCAGCTTTGGGAGATGTCATTGCTTCCCTCGCTCAGAAAAATCCACATGTCCCTTATAGAAACAGCAAACTCACTCAATTACTGCAAGATTCACTCGGTGGGCAGGCCAAGACACTAATGTTTGTTCATATCAGTCCTGAAATTGACGCTGTTGGAGAAACAATCAGCACCTTAAAATTCGCAGAAAGGGTTGCTACCGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAGCTGAAAGAACAGATTGCCAACCTTAAGGCAGCATTGGCAAGAAAGGAGGGGGAATCAGAACTAATGCAACATTCTTTATCTGCCAGCTCGGATAAATACAGGACAAAGGCGACTGAGCTATCTCCTTATCATAATAACCAGAGAAGTGCAGACACAGTGGGTGATCTTGGATGCCGGCAACCAATGGTGGAAGTAGGCAACATAGAGCTTCATAGCAATACTGCAATAAGGCAAAAAACGCAGagctttgattttgatgagataaCAGCAAATTCACCACCTTGGCCCCCAGTTAATAGTCCTGGACAAAACTATGGAGAAGACGATAGAGAAACTGGGCCAGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCAAGATGTAAGCAAAACTGAGAACGCCTTGGGGTGTTGGGACACCGATAATGGCCACTTATCTGATGTCTTTTATCAGAAATATCTTCAAGATTCTTCCAAAATATACTCAGAACGATCTTATAACATGTTCATGGGAGGCAACCAGTTCAATATTGCTGGTTCAGATGATTTGGATGATCTTGATGCCGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTCAACCATTCCAAACTTAACGGCATACCCAACGGAATTGGGTCAAAGACTAAGAGATCTGTCTCAAAGATCCCAAAAAGCCCAGAATTGAGCAAGAATATGAATTCTGCTCTCGGGCCATCACCTTCGCGGAAACCAGTAAATGGTGTCTCTAATCGAACAGGGAGGCATCCAGCTCCAGTtgacatgaaaaagaaaactgggAACAGGAAGTA 3029 0.4193 MAAEAALSFSVASVVEDVLQQQNRMKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPTEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPVDSALIPDGAPLTAFQYFENVRNFLVAAQEIGLPTFEASDLEQGGKSARIVNSVLALKSYCEWKQSGANGVWKFGGNLKPATSGKSFVRKNSEPFTNSLSRTSSINEKSLNACTSDVEPNKMSGSHSLSMLVRAMLSDKKPEEVPMLVESVLNKVVEEFEHRIATQGEQTRTTSRNFVVSQGNGSVSKSALVDKKAENKIPTVTKKEENVHKRRFLDEELLKQQMLFDQQQRDIQELKHTIQTTKAGMQFMQMKFHEDFHNLGKHVHDLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSAQSNYMSTVEHIEEGTITINVPSKNGKGRRSFNFNKVFGPSASQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNRRYPFANHFSNRGLSVPDASLVPVSSTFDVIDLMNLGQRNRAVGATALNDRSSRSHSCLTVHIQGRDLTSGSILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEIDAVGETISTLKFAERVATVELGAARVNKDSADVKELKEQIANLKAALARKEGESELMQHSLSASSDKYRTKATELSPYHNNQRSADTVGDLGCRQPMVEVGNIELHSNTAIRQKTQSFDFDEITANSPPWPPVNSPGQNYGEDDRETGPGEWVDKVMVNKQDVSKTENALGCWDTDNGHLSDVFYQKYLQDSSKIYSERSYNMFMGGNQFNIAGSDDLDDLDAATSDSSEPDLLWQFNHSKLNGIPNGIGSKTKRSVSKIPKSPELSKNMNSALGPSPSRKPVNGVSNRTGRHPAPVDMKKKTGNRK 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03014 1009 Coils Coil 728 755 - -
Bva13g03014 1009 Pfam Calponin homology (CH) domain 40 161 IPR001715 GO:0005515
Bva13g03014 1009 SMART kinesin_4 393 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 ProSiteProfiles Calponin homology (CH) domain profile. 39 161 IPR001715 GO:0005515
Bva13g03014 1009 Gene3D - 25 179 IPR036872 -
Bva13g03014 1009 CDD KISc_C_terminal 393 723 - -
Bva13g03014 1009 MobiDBLite consensus disorder prediction 947 988 - -
Bva13g03014 1009 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1006 - -
Bva13g03014 1009 Gene3D Kinesin motor domain 390 763 IPR036961 -
Bva13g03014 1009 SMART ch_5 41 159 IPR001715 GO:0005515
Bva13g03014 1009 MobiDBLite consensus disorder prediction 827 851 - -
Bva13g03014 1009 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1006 - -
Bva13g03014 1009 Coils Coil 18 38 - -
Bva13g03014 1009 Pfam Kinesin motor domain 401 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 ProSiteProfiles Kinesin motor domain profile. 395 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 MobiDBLite consensus disorder prediction 947 1009 - -
Bva13g03014 1009 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 PRINTS Kinesin heavy chain signature 468 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva13g03014 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 757 IPR027417 -
Bva13g03014 1009 SUPERFAMILY Calponin-homology domain, CH-domain 37 172 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03014 Bva-Chr13 21466955 21472976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03014 383 759 Calmodulin-binding Proteins AT5G65930 41.253 4.39e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03014 K10406 - gmx:100801279 1628.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g03014 13 21466955 21472976 Bva13g03014 13 21466955 21472976 ECH