Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03001 ATGGCTTCCAAGATCTTTTGTTTTGCTACGTTGACATTGCTCTTTCTCCTTACCTTGCTTGCATTACAAGCAAATGCAGGAACCATTTGCGACTCAACCCCATATCCAGCTTATTGCAAAGCTGTGCTTCCTAAGCAACTTGCTGAAGTTCACGACTTTGGCAGGTTCTCTGTCCAAAAATCCTTAATTCAGAGCCGCAAGTTTTCCAACTTGGTAAACTTCTATCTTGGTGGCAAGTCCAGCTTGTCCGAAAGGACAACTCGTGCATTGGGCGATTGCCAATTTCTTTCTCAACTCAATGTTGACTACTTAACAAAGTCCAATAAGTTTGTGACCAAGGCTGGTAATACTCTTTCTGATTCTGAAGCTGATGATGCCCAAACCCTGCTCAGTGCCATTATAACCAACCAACAGACTTGTTTGGAGGGATTAATGACCACAGCTTCTGATTTGAGCATAAAGAATGGGCTTTTTGGTCCACTTTCTGACGACAGTAAGCTCCACAGTCTATCTTTGGCTCTGTTCACAAAGGGTTGGGTTCATAAGAAGAATGCTCCCATAACATGGGATTTCCAAGGATGGCACCCGGGTTTCAGAAATGGTCGATTACCTCTCAGGATGTCAAAAAGATTACGTGCCATTTTTAACTCAGTAAGAGGCAGGAGAGGAAGGAGAAACCCTAATGACAACGAcgatgaaaatgaagatggcGTTTTGATAAATGACATTGTGGTTGTGAGTAAAGATGGAAGTGGAAACTTCACCACTATCAACGACGCCGTCGCTGCAGCTCCTATTAACTCTAATGGAACCGATGGCTATCACTTGATTTATATCAAAGAGGGTGTCTATGAAGAATACGTGTCCATTCCCATAAACCAGCCCTATTTGATGATGATCGGGGCAGGAATCAACCGGACAATTATCACAGGCAACCGTAGCGCCGGTGATGGATGGACAACATTCAATTCAGCCACATTTGCTGTGGTGGCACCCGGATTTGTAGCAGTGAACATAACATTCCGCAACGCTGCTGGGCCAAGCAAGTTCCAAGCAGTGGCTATGAGAAGTGGTGCAGATATGTCAACATTCTACAGCTGCAGCTTTGAAGGCTACCAAGATACTCTATACACACATTCTTTGAGGCAATTTTACAGAGAATGTGACATTTATGGCACAATAGATTTCATACTAGGAAACGCTGCAGTTGTTTTGCAAAAATGCAACATATACCCGCGACTTCCATTACCAGGACAGTTCAATCCCATCACAGCTCAAGGAAGAACAGACCCAAATCAGAACACTGGCATTTCCATTCATAACTGTACCATTAAAGCTGCTAATGATTTAGCTCCAAGTGTTGGTACTGTGAAAACATATCTAGGGAGGCCATGGAGGGAGTATTCAAGGACCGTGGTTATGCAGTCATACTTGGACAGTTTAATAGACCCAGCTGGTTGGTCTGAATGGGATGGGGATTTTGCACTGAACACATTGTATTATGCAGAGTATGATAACAGCGGAACTGGATCAGACACTTCCAACAGAGTAACATGGCCTGGATTCCATGTCATTAATGCCACAGATGCAGCTAATTTCACAGTCGCTAACTTTCTTCAGGGAAATGATTGGGTGCCTCAAACTGGAGTTCCTTATATTCGTGGCTTGATAGCAACTGACAAGAAGGGAAAAGTGATTGACACCGGAAATTA 1712 0.4317 MASKIFCFATLTLLFLLTLLALQANAGTICDSTPYPAYCKAVLPKQLAEVHDFGRFSVQKSLIQSRKFSNLVNFYLGGKSSLSERTTRALGDCQFLSQLNVDYLTKSNKFVTKAGNTLSDSEADDAQTLLSAIITNQQTCLEGLMTTASDLSIKNGLFGPLSDDSKLHSLSLALFTKGWVHKKNAPITWDFQGWHPGFRNGRLPLRMSKRLRAIFNSVRGRRGRRNPNDNDDENEDGVLINDIVVVSKDGSGNFTTINDAVAAAPINSNGTDGYHLIYIKEGVYEEYVSIPINQPYLMMIGAGINRTIITGNRSAGDGWTTFNSATFAVVAPGFVAVNITFRNAAGPSKFQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTIDFILGNAAVVLQKCNIYPRLPLPGQFNPITAQGRTDPNQNTGISIHNCTIKAANDLAPSVGTVKTYLGRPWREYSRTVVMQSYLDSLIDPAGWSEWDGDFALNTLYYAEYDNSGTGSDTSNRVTWPGFHVINATDAANFTVANFLQGNDWVPQTGVPYIRGLIATDKKGKVIDTGN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03001 570 Pfam Plant invertase/pectin methylesterase inhibitor 28 169 IPR006501 GO:0004857
Bva13g03001 570 PANTHER PECTINESTERASE 16 555 - -
Bva13g03001 570 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 16 555 - -
Bva13g03001 570 Pfam Pectinesterase 244 542 IPR000070 GO:0030599|GO:0042545
Bva13g03001 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 177 IPR035513 -
Bva13g03001 570 SUPERFAMILY Pectin lyase-like 241 555 IPR011050 -
Bva13g03001 570 SMART PMEI_2 21 174 IPR006501 GO:0004857
Bva13g03001 570 Gene3D - 242 558 IPR012334 -
Bva13g03001 570 CDD PMEI-like_3 28 179 - -
Bva13g03001 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03001 Bva-Chr13 21397728 21399605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g03001 8 558 Carbohydrate Esterase AT4G02330 59.155 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03001 K01051 - rcu:8259897 731.865