Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02999 ATGGCTTTCGCACACTCGTTTCCACTTGTGCTTTTCATCTTTGCATCGTTATCTCTTGCAGATAAGCATGCAACCTCCCCTGTTCCACCAGAAACCTTTTGCCACTCAACCAGAGACCCTTCTTATTGCAATAATGTGTTTGCTAACCAAAATGGCAATATCCATGACTATGGCCGCATTTCTTTCCGAAAATCCTTATCACAGTCCCGTAAGTTCTTGAGCTTAGTAGACTCGTATCTTCAATCAAGCTCCTCTTTTTCTCAACCTATTGTTCGCGCTCTTCAAGATTGTCACTTCCTCGCTGAACTAAACTTGGAGTACTTGTCAAACACCTTTGACATTGTGGATAAAACTAACAATGTTCTTGCTAGCTCACAAGCTGAAGATATCCAAACCTCGCTTAGTGCCGTTTTGACAAACCAACAGACTTGTTTGGATGGCCTGGAGACTGTTGCTTCGAATTCAAGAGTGAAGAATGACCTTTCACTTCCACTCTCTGATGACACCAAGCTTCACAGTCTGTCGCTGGATATCTTCGCCAAAGGGTGGATGCCTGAGAAGAAAATTGCAACATCATGGGCACGCAATGGGAGACATTTGAATTTCCGGAACGGTCGTTTACCATTGAAGATGTCAGAACGAGTGCGTGCCATTTATGATTCCGCTAGAGGCCATCGTGGGCACGGGAGAAAACTACTTCAGACTGGGGATGAGGAAGAAACTGTGCTAGTTCTGGATATTGTGATTGTAAGTCAGGATGGAAGCGGTAACTTCACCACCATCAACGATGCTATAGCTGCGGCCCCTAATAACACTGCTGCTAGTGCTGGCTACTTCATGATTTACATCACTGAGGGTGTGTATCAAGAATACGTATCCATAGATAAAAAGAAGACCTACTTGATGTTACTCGGAGATGGAATCAATCGCACAATCATCACCGGCAATCAAAATGTTGTGGACGGCTCTACAACATTTAATTCTGCAACATTTGCTGTAGTGGCACCAAGGTTTGTAGCCGCGGGCATAACATTCCGTAACACCGCGGGGCCAAGCAAGCACCAAGCCGTGGCAATGAGAAGCGGAGCAGATATGTCCACATTCTACAGCTGCAGCTTTGAAGCTTACCAAGACACTCTGTACACACATTCTCTCAGGCAATTTTACAGAGAATGTGACATCTACGGCACCGTTGACTTCATATTCGGAAACGCTGCAACGGTTTTGCAAAACTGCAACATCTATCCACGGCTACCCATGAGTGGTCAATTCAATGCCATCACTGCACAAGGTCGAACCGACCCGAATCAGAACACTGGCATTTCCATCCAAAATGCTACCATAAGAGCTGCTGATGATTTGGCTCCAAGTGTTGGCACTGTGAAAACGTACCTTGGAAGGCCATGGAAGGAATATTCAAGGACGGTGTATATGCAGTCATTCATGGATAGTTTCATAAATCCTGCTGGTTGGCATGAATGGGATGGTGATTTTGCACTCAGCACACTGTATTACGCAGAGTACAGCAACACAGGACCTGGTTCAAGCACTGCTAACAGAGTAACATGGAATGGTTACCATGTCATCAATGCAACTGATGCTGCAAACTTTACAGTGTCTAACTTTATGGCAGGGGATGCTTGGTTGCCTCAAATTGGAGTCCCATACTTAAGTGGGTTATA 1682 0.4512 MAFAHSFPLVLFIFASLSLADKHATSPVPPETFCHSTRDPSYCNNVFANQNGNIHDYGRISFRKSLSQSRKFLSLVDSYLQSSSSFSQPIVRALQDCHFLAELNLEYLSNTFDIVDKTNNVLASSQAEDIQTSLSAVLTNQQTCLDGLETVASNSRVKNDLSLPLSDDTKLHSLSLDIFAKGWMPEKKIATSWARNGRHLNFRNGRLPLKMSERVRAIYDSARGHRGHGRKLLQTGDEEETVLVLDIVIVSQDGSGNFTTINDAIAAAPNNTAASAGYFMIYITEGVYQEYVSIDKKKTYLMLLGDGINRTIITGNQNVVDGSTTFNSATFAVVAPRFVAAGITFRNTAGPSKHQAVAMRSGADMSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAATVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIRAADDLAPSVGTVKTYLGRPWKEYSRTVYMQSFMDSFINPAGWHEWDGDFALSTLYYAEYSNTGPGSSTANRVTWNGYHVINATDAANFTVSNFMAGDAWLPQIGVPYLSGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02999 560 Pfam Plant invertase/pectin methylesterase inhibitor 31 161 IPR006501 GO:0004857
Bva13g02999 560 PANTHER PECTINESTERASE 14 559 - -
Bva13g02999 560 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 559 - -
Bva13g02999 560 SMART PMEI_2 25 178 IPR006501 GO:0004857
Bva13g02999 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 162 IPR006501 GO:0004857
Bva13g02999 560 Gene3D - 244 560 IPR012334 -
Bva13g02999 560 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Bva13g02999 560 SUPERFAMILY Pectin lyase-like 247 559 IPR011050 -
Bva13g02999 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Bva13g02999 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 181 IPR035513 -
Bva13g02999 560 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Bva13g02999 560 CDD PMEI-like_3 32 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02999 Bva-Chr13 21392218 21394186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02999 8 560 Carbohydrate Esterase AT1G02810 60.801 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02999 K01051 - gmx:100786124 835.484