Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02998 ATGATGGGACAAGCTATCATGTTCTACGGAGACAAGTTGAGGGATTTCAACAGGGAACTTCCATATAATATAGGGCAACTCATATGCCGCCCAATCATACCTGATCTTTTGGAAAATGCTGCAGCGTCTGTTGATCCTCCTGGGAGCTTGGAAAACAAGGCTTCAACCAAGAAGATATTACGGCcggaaaatgaaaagaataATAACAATGCAACCTCCCCTATTCCACCAGAGACCATTTGCCATGCAACCACAGACCCTTCTTACTGCAATAATGTGTTTGCTAACCAAAATGGCAATATCTACGACTATGGTCGCATTTCTTTCCGAAAATCCTTATCACAGTCACTTAAGTTCTTGAGCCTAGTGGAATCCTATCTTCAGTCAAGCTCGTCTTTTTCTCAACCTATTCTTCTTGCCCTTGAAGATTGTCGCTTCCTCGCTGAGCTAAACTTGGAGTACTTATCAAACACCTTTGACATTGTGAGTAAAACTAGCAATATCCTCGCTAGCTCACAAGCTGAAGATATCCAAACCTCGCTTAGTGCCGTTTTGACAAACCAGCAGACTTGTCTAGAGGGCCTAGAAACTGTTGCTTCGAATTCAAGAGTGAAGAATGAACTTTCACTTCCACTCTCTGATGATACCAAGCTTCACAGTCTGTCCCTGGATATCTTCGTCAAAGGGTGGGTTCCTGAGAAGAAAATTGCAACATCATGGGCTCCCAATGGGAGACATTTGGGTTTTCGCAATGGTCGCTTACCATTGAAGATGTCTGAGCGAGTCCGTGGGATTTATGATTCCGCTAGAGGCCATCATGGGCACGGGAGAAAACTTCTTCAGGCTGCGGATGCCGAAAGTGTCCTAATTCAGGATATTGTCGTTGTAAGTCAGGATGGAAGCGGTAACTTCACCACCATCAATGATGCTATAGCTGCAGCATCTAACAACACGAATGCTACTGCTGGATACTTTTTGATATACATCACCCAGGGTGTGTATCAAGAATATgtatctataaataaaagcaaggCCTATTTGATGTTAGTTGGCGACGGAATCAATCGCACAATTATCACGGGCAACCACAGTGTTGATGATGGGTGGACAACATTTAACTCGGCAACATTTGCTGTAGTAGCACCAGGGTTTGTGGCAGTGAACATAACATTCCGTAACACTGCGGGGCCAGGCAAGCACCAAGCCGTTGCAATGAGGAGCGGAGCAGATATGTCCACATTCTATAGCTGCAGCTTTGAAGCGTATCAAGACACTCTGTACACACATTCTCTCAGGCAATTTTACAGAGAATGTGACATCTATGGCACCGTTGACTACATATTTGGAAACAGTGCAGCTGTTCTACAAAATTGCAACCTCTATCCACGGCTACCCTTGACTGGTCAATTCAACACCATCACAGCTCAAGGTCGAACCGACATAAATCAGAACACTGGCATTTCCATCCAAAATGCTACCATAAGAGCTGCTGATGATTTAGCTCCACAAGTTGGGACTGTGCAAACATACCTTGGGAGGCCATGGAAGCAATATTCAAGGACAGTGTATATGCAGTCATTCATGAATAGTTTCATAAATCCTGCTGGTTGGCATGAATGGGATGGTGATTTTGCACTCAGCACACTGTATTACGCCGAGTACAGCAACACAGGACCTGGTTCAAGCACTGCTAACAGAGTAACATGGCCTGGTTACCATGTTGTCAATGCAACTGATGCAGCAAACTTTACAGTGTCTAACTTTGTTGCAGGAGATGGCTGGCTGCCTCAAACTGGTGTCCCATACTTAAGTGGGTTATA 1820 0.4385 MMGQAIMFYGDKLRDFNRELPYNIGQLICRPIIPDLLENAAASVDPPGSLENKASTKKILRPENEKNNNNATSPIPPETICHATTDPSYCNNVFANQNGNIYDYGRISFRKSLSQSLKFLSLVESYLQSSSSFSQPILLALEDCRFLAELNLEYLSNTFDIVSKTSNILASSQAEDIQTSLSAVLTNQQTCLEGLETVASNSRVKNELSLPLSDDTKLHSLSLDIFVKGWVPEKKIATSWAPNGRHLGFRNGRLPLKMSERVRGIYDSARGHHGHGRKLLQAADAESVLIQDIVVVSQDGSGNFTTINDAIAAASNNTNATAGYFLIYITQGVYQEYVSINKSKAYLMLVGDGINRTIITGNHSVDDGWTTFNSATFAVVAPGFVAVNITFRNTAGPGKHQAVAMRSGADMSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDYIFGNSAAVLQNCNLYPRLPLTGQFNTITAQGRTDINQNTGISIQNATIRAADDLAPQVGTVQTYLGRPWKQYSRTVYMQSFMNSFINPAGWHEWDGDFALSTLYYAEYSNTGPGSSTANRVTWPGYHVVNATDAANFTVSNFVAGDGWLPQTGVPYLSGL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02998 606 Pfam Plant invertase/pectin methylesterase inhibitor 78 209 IPR006501 GO:0004857
Bva13g02998 606 ProSitePatterns Pectinesterase signature 2. 440 449 IPR033131 -
Bva13g02998 606 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 72 605 - -
Bva13g02998 606 SUPERFAMILY Pectin lyase-like 291 605 IPR011050 -
Bva13g02998 606 Gene3D Invertase/pectin methylesterase inhibitor family protein 78 228 IPR035513 -
Bva13g02998 606 SMART PMEI_2 72 225 IPR006501 GO:0004857
Bva13g02998 606 Gene3D - 288 606 IPR012334 -
Bva13g02998 606 CDD PMEI-like_3 79 226 - -
Bva13g02998 606 MobiDBLite consensus disorder prediction 44 78 - -
Bva13g02998 606 PANTHER PECTINESTERASE 72 605 - -
Bva13g02998 606 Pfam Pectinesterase 294 592 IPR000070 GO:0030599|GO:0042545
Bva13g02998 606 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02998 Bva-Chr13 21385334 21389559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02998 79 606 Carbohydrate Esterase AT1G02810 61.679 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02998 K01051 - gmx:100786124 816.994