Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02997 ATGTTTTTCATCTTTGCATCGTTCTCTATTGCAGATAACCATGCAACCTCCCCTATTCCACCAGAGACCATCTGCCAGTCGACCATGGACCCTTCTTATTGCAAAAATGTGCTTGCAAATCAAAATGGCAATGTCTATGACTATGGCCGCTTTTCTTGCCAAAAATCCTTATCACAGTCCCGTAAGTTCTTGAGCTTAGTGGACTCGTATCTTCAATCAAGCTCCTCTTTTTCTCAACCTATTGTTCGCGCTCTTCAAGATTGTCGCTTCCTCGCTGAGCTAAACTTGGAGTACTTATCAAACACCCTTGGCATTGTGAATAAAACTAGCAACGTTCTTGCTAGCTCACAAGCTGAAGATATCCAAGCCTCGCTTAGTGCCGTTTTGACAAACCAACAGACTTGTTTGGATGGTCTTGAGACTGTTGCTTCGAATTCAAGAGTGAAGAGTGAGCTTTCTCTTCCACTCTCTGATGACACCAAGCTTCACAGCGTCTCCCTGGCTCTCTTCACAAGAGGCTGGGTGCCTGAGAAGAGAATCACAACTTCATGGCAACAAGATGGTTTTCATTTGGATTTCAACAATGGTCGTTTACCTTTGATAATGTCAGACAGAGTACGTGCTGTTTATGATTCAGCTAGAGCTGGCCAAGGCAGAAAACTACTTCAGGTTGTCAATAACGGCGTGCTGGTTAGAAACGTCGTAGTTGTTAGCAAGGATGGAAATGGAAACTACACCACCATCAACGCTGCTATAGCAGCTGCCCCGAATAACACTGCTGCTAGTGCTGGCTACTTTCTGATTTATATCAAAGCAGGTGTGTATCAAGAATATGTATCCATAGATAAAAAGAAGACTTACTTGATGCTAGTTGGCGATGGTATCAACCGCACAATTATCACAGGAAATCGCAATGTTGTTGATGGGTGGACAACATTTAACTCAGCAACACTTGCTGTGGTAGCACCAGGGTTTGTAGCAGTTAATATAACATTCCGCAACACTGCTGGGCCAAGCAAGCATCAAGCAGTGGCAATGAGGAGTGGGGCAGACATGTCAACATTCTACAGCTGCAGCTTTGAGGGGTACCAAGACACTCTGTACACACATTCTCTCAGGCAATTTTACAGAGAATGTGACATCTACGGCACAGTTGACTTCATATTTGGAAACGCTGCAACTGTTTTGCAAAACTGCAACATCTATCCACGGCTACCCATGAGTGGTCAATTCAATGCCATCACTGCACAAGGTCGAACCGACCCGAATCAGAACACTGGCATTTCCATCCAAAGTGCTACCATAAGAGCTGCTGATGATTTGGTTCCAAGTGTTGGCACTGTGAAAACGTACCTTGGAAGGCCATGGAAGGAATATTCAAGGACGGTGTTTATGCAGTCATTCATGGACAGTTTGATAGACCCTGCTGGTTGGCGTGAATGGAGTGGTATTTTTGCTCTCAGCACATTGTACTACGCTGAGTATAGTAATACAGGACCTGGTTCAAGCACCGCTAACAGAGTAACATGGCCTGGTTACCATGTTATCAATGCAACAGTTGCTTCCAATTTTACAGTGTCTAACTTCCTGACCGGGGATGCTTGGATACCTCGAACTGGAGTCCCATACTCGAGTGGTTTAATATA 1646 0.4459 MFFIFASFSIADNHATSPIPPETICQSTMDPSYCKNVLANQNGNVYDYGRFSCQKSLSQSRKFLSLVDSYLQSSSSFSQPIVRALQDCRFLAELNLEYLSNTLGIVNKTSNVLASSQAEDIQASLSAVLTNQQTCLDGLETVASNSRVKSELSLPLSDDTKLHSVSLALFTRGWVPEKRITTSWQQDGFHLDFNNGRLPLIMSDRVRAVYDSARAGQGRKLLQVVNNGVLVRNVVVVSKDGNGNYTTINAAIAAAPNNTAASAGYFLIYIKAGVYQEYVSIDKKKTYLMLVGDGINRTIITGNRNVVDGWTTFNSATLAVVAPGFVAVNITFRNTAGPSKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAATVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQSATIRAADDLVPSVGTVKTYLGRPWKEYSRTVFMQSFMDSLIDPAGWREWSGIFALSTLYYAEYSNTGPGSSTANRVTWPGYHVINATVASNFTVSNFLTGDAWIPRTGVPYSSGLI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02997 548 PANTHER PECTINESTERASE 9 546 - -
Bva13g02997 548 SMART PMEI_2 16 169 IPR006501 GO:0004857
Bva13g02997 548 SUPERFAMILY Pectin lyase-like 230 546 IPR011050 -
Bva13g02997 548 ProSitePatterns Pectinesterase signature 1. 262 281 IPR018040 -
Bva13g02997 548 CDD PMEI-like_3 23 174 - -
Bva13g02997 548 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Bva13g02997 548 Gene3D - 229 547 IPR012334 -
Bva13g02997 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 172 IPR035513 -
Bva13g02997 548 Pfam Plant invertase/pectin methylesterase inhibitor 22 169 IPR006501 GO:0004857
Bva13g02997 548 Pfam Pectinesterase 235 533 IPR000070 GO:0030599|GO:0042545
Bva13g02997 548 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 9 546 - -
Bva13g02997 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 172 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02997 Bva-Chr13 21380956 21382690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02997 23 548 Carbohydrate Esterase AT1G02810 63.472 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02997 K01051 - gmx:100786124 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02997 13 21380956 21382690 Bva13g02997 13 21380956 21382690 ECH