Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02996 ATGGCTTCTTACAAGCTCTGTTCTCTCCCAAGAGTTGCATTTCTTATTCTGCTGCCCTTCTTAGCCTGTGTAGCTTATGCTGCTTCCACCACTCCCAGTCCCACCTCATCTGTCTCTACTGGCACTGTTTGCCAATCTACCCCTGATCCATCTTATTGCAAATCAGTCCTCCCTCCTCTAAACGGCAACGTTTATGACTATGGCAGGTTTTCAGTTAGGAAGTCATTGTCCCAAGCTCAAAAATTCTTGAACTTGGTTGACAAGTACCTCCGGCAACAGTCTAGGTTGTCCATCTCCGCCGTCCGTGCATTGCAAGATTGCCGGACACTTGGAGAGCTGAACTATGAATTCCTTTCAAGTTCGTTTCAAACTGTGAACAAGACAGCGAGGTTTCTCCCCACTTCGCAAGCAGACAATATCCAAACTCTGCTGAGTGCAATCTTAACCAACCAGCAAACCTGCTTGGATGGCCTTAAAGACACTGCTTCCGCTTGGAGCGTTAGAAATGGGCTTTCTGTACCGCTTTCTAACGACACCAAGCTCTACAGTGTCTCTCTGGCTCTATTCACAAAGGGTTGGGTTCCAAATACTAAAAAGAAACCCAATGCAGCTGGGTTGCCCAGGACAAATAATAGGAAACTGATTGGTTTCCGAAATGGCCATTTGCCCCATAAAATGTCAAGCAGAACCCGTGCCATTTACGAGTCTGTGAGTCGAAGAAACCTGCTTCAAACCACAGTGAGAGAGGGTGTTTTGGTCAAAGACATGGTGACTGTGAGTCAAGATGGAAGTGGAAACTTCACAACCATCAATGACGCCCTCGCCGCAGCTCCAAACAGATCTTCGTCGTTAGACAAAAGTGGCTACTTCCTCATCTATGTCACGGCGGGTGTCTACGAAGAATACGTGACCGTTGATAAGAAAAAGAGGTACACCATGATGATCGGAGACGGCATCAACAAGACAATCATCACCGGGAATCGCAGTGTCGTTGATGGCTGGACAACCTTCAACTCTGCAACATTTGCCGTGGTTGCTCCTGGATTCGTGGCCGTGAACATGACTTTCCGTAACACTGCGGGGCCAAGCAAGCACCAAGCCGTTGCAGTTCGGAATGGAGCTGATTTGTCCACGTTTTACAGCTGTAGCTTCGAGGGGTACCAGGATACCCTATATACACACTCTCTCAGGCAATTCTACAGAGAATGTGACATTTATGGAACagtggattttatttttggaaacgCCGCCGTTGTTTTCCAAAACTGCAACCTATATCCCCGTTTACCAATGAGTGGACAATTCAATGCCATTACTGCTCAAGGCCGAACCGACCCGAATCAGAATACGGGTACTTCGATCCATAACTGCGCCATTAGAGCTGCTGATGATTTGGCTGCTAGCAGCGGAGCAGCCGCAACCTATTTGGGAAGACCCTGGAAGCAGTATTCAAGGACGGTTTATATGCAGACATTCATTGATGGTGTGGTGGATGCCGCGGGTTGGCGTGCATGGGATGGTGATTTTGCATTAAGCACGCTGTATTATGCTGAGTTTGACAATAATGGTCCCGGGTCGGACACATCTAAACGGGTTACATGGCCGGGTTACCATTTGATCAACGCTACGGATGCCTCTAACTTCACGGTCTCTAACTTCTTGCTAGGAGATGATTGGTTGCCCAAGACAGGAGTCACCTACGATAGCAGCTTAATATG 1718 0.4738 MASYKLCSLPRVAFLILLPFLACVAYAASTTPSPTSSVSTGTVCQSTPDPSYCKSVLPPLNGNVYDYGRFSVRKSLSQAQKFLNLVDKYLRQQSRLSISAVRALQDCRTLGELNYEFLSSSFQTVNKTARFLPTSQADNIQTLLSAILTNQQTCLDGLKDTASAWSVRNGLSVPLSNDTKLYSVSLALFTKGWVPNTKKKPNAAGLPRTNNRKLIGFRNGHLPHKMSSRTRAIYESVSRRNLLQTTVREGVLVKDMVTVSQDGSGNFTTINDALAAAPNRSSSLDKSGYFLIYVTAGVYEEYVTVDKKKRYTMMIGDGINKTIITGNRSVVDGWTTFNSATFAVVAPGFVAVNMTFRNTAGPSKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCAIRAADDLAASSGAAATYLGRPWKQYSRTVYMQTFIDGVVDAAGWRAWDGDFALSTLYYAEFDNNGPGSDTSKRVTWPGYHLINATDASNFTVSNFLLGDDWLPKTGVTYDSSLI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02996 572 PANTHER PECTINESTERASE 31 570 - -
Bva13g02996 572 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 31 570 - -
Bva13g02996 572 Gene3D - 251 571 IPR012334 -
Bva13g02996 572 SUPERFAMILY Pectin lyase-like 253 568 IPR011050 -
Bva13g02996 572 Pfam Plant invertase/pectin methylesterase inhibitor 42 188 IPR006501 GO:0004857
Bva13g02996 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 191 IPR035513 -
Bva13g02996 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 191 IPR035513 -
Bva13g02996 572 SMART PMEI_2 33 188 IPR006501 GO:0004857
Bva13g02996 572 CDD PMEI-like_3 42 193 - -
Bva13g02996 572 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Bva13g02996 572 Pfam Pectinesterase 257 557 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02996 Bva-Chr13 21376368 21378200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02996 12 572 Carbohydrate Esterase AT1G02810 63.339 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02996 K01051 - gmx:100792319 877.856