Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02995 atgaagtgcatcacaaaatttttcttcctctggGCCATGTGCCTCGTATTTGTTCCAAGCCAAATAGGTGCAGAAGGAGAAGCCAAAGGCAAGGAACTAATTGACAAGGTGTGCCAGGGTTCGGGTGTCAAAGATCTATGCTTGAGCATTCTTTCATCAGACCCAGGAAGCCAGGAAGAAAACGAAAATGGTCTGGCAATGATAGTACTGTCTACGGCTAACAAAAATGCGACGGACATAATCAGACACATAAAGTTGTTGGAAACAAATGACAGTTTGGCTCCTATGGTTCAACAGGGATTGGCTGATTGCAGAGACACGTACCAAGACGCAGAGGATCAGCTGGAGGATGCTGTTGCTTCCTTGGTTGAAGGTAACACGAAAGATGCTCAGAAATGGCTCCAAGCTGCATTGGCTGCTAGCGATACCTGTGAGGATTCCCTCAAAGGAAATGAGAACATTCTCTTGGAGAAGACTGAAGCTTTTCGCCAGTTGTGCAGCATGTCCTTATCCATCGTCAAGAACTTGCCAGCAGCAGCGGCAGCATCGGCGCCAGCGGAAGCTAATTA 569 0.4499 MKCITKFFFLWAMCLVFVPSQIGAEGEAKGKELIDKVCQGSGVKDLCLSILSSDPGSQEENENGLAMIVLSTANKNATDIIRHIKLLETNDSLAPMVQQGLADCRDTYQDAEDQLEDAVASLVEGNTKDAQKWLQAALAASDTCEDSLKGNENILLEKTEAFRQLCSMSLSIVKNLPAAAAASAPAEAN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02995 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 176 IPR035513 -
Bva13g02995 189 Pfam Plant invertase/pectin methylesterase inhibitor 33 172 IPR006501 GO:0004857
Bva13g02995 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 176 IPR006501 GO:0004857
Bva13g02995 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
Bva13g02995 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 3 175 - -
Bva13g02995 189 Coils Coil 101 121 - -
Bva13g02995 189 PANTHER PECTINESTERASE 3 175 - -
Bva13g02995 189 SMART PMEI_2 29 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02995 Bva-Chr13 21374961 21375777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02995 29 148 Carbohydrate Esterase AT5G53370 28.682 2.02e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02995 - - gmx:100791255 150.214