Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02981 ATGAGCCGCGGGGCAGCAACTGGAGCGAAGGGGAAGAAGAAGGGAGCATCCTTTGTCATCGATTGTGCGAAGCCAGTCGAAGATAAGATCATGGACGTCGCCTCACTGGAGAAGTTCCTTCAGGAGAGGATTAAAGTGGGAGGCAAGGCTGGTGCATTGGGTGATTCGGTCACCGTCACCCGTGACAAGAGCAAGATCACCGTCACCTCCGACAGTAACTTCTCCAAAAGGTATCTGAAATATCTAACCAAGAAGTACTTGAAGAAGCACAACGTGAGGGATTGGCTTCGGGTGATCGCCTCCAACAAGGAAAGGAATGTCTATGAATTAAGATACTTCAACATTGCTGAGAATGAGGGTGAGGAGGAAGACTG 374 0.4973 MSRGAATGAKGKKKGASFVIDCAKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02981 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Bva13g02981 124 Gene3D - 5 124 IPR038526 -
Bva13g02981 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Bva13g02981 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02981 Bva-Chr13 21317707 21319143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02981 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.290 2.81e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02981 K02891 - gmx:100500073 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02981 13 21317707 21319143 Bva13g02981 13 21317707 21319143 ECH