Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02978 ATGTTGCTGCTTGCGTTTgtgtttctttccttcctcaCAAACACTAGTCATTTGGTTTCTGCAGAAGGGAATGGCTATGCTAGAGAGGCTTGCAGAGTGACTAGGTATCCAGACCTTTGCGTCCACTCGCTGTCATCATTCTCTAATATTGCCGGAAGAAGCCCCAGCAAGTGGGCACGGGCAGGAGTGTCGGTGACAATAGGAGAGGTCAAGAGTGTTCAAGCATATCTCAAGAGGTATCGACGCGTGAGAGGAAGAAACAGAGTTGCCCTTTCAGATTGTATTGAGAATTTTGCAGATGCACTCGATGAGCTTCACAGATCACTGGGTGTGCTGCGAAAGCTAAGCAAAAGCACATTTGGGACCCAAATGGGGGACCTCAACACATGGATTAGTGCAGCATTCACTGATGCCGGCAGTTGCCTTGATGGGTTTGAAGGCCAAAAGGGAAGGCAGATCAAACTGCTCCAAAACAGGGTTCGCAATGCTTCTTACATAACCAGTAATGCTCTTGCTCTTGTCAACAAACTTGCGGCCACTGGTTCGGAAAGCATATCTGATCCATA 566 0.4647 MLLLAFVFLSFLTNTSHLVSAEGNGYAREACRVTRYPDLCVHSLSSFSNIAGRSPSKWARAGVSVTIGEVKSVQAYLKRYRRVRGRNRVALSDCIENFADALDELHRSLGVLRKLSKSTFGTQMGDLNTWISAAFTDAGSCLDGFEGQKGRQIKLLQNRVRNASYITSNALALVNKLAATGSESISDP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02978 188 Pfam Plant invertase/pectin methylesterase inhibitor 28 173 IPR006501 GO:0004857
Bva13g02978 188 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 172 - -
Bva13g02978 188 CDD PMEI-like_3 30 179 - -
Bva13g02978 188 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 172 - -
Bva13g02978 188 SMART PMEI_2 22 173 IPR006501 GO:0004857
Bva13g02978 188 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 177 IPR006501 GO:0004857
Bva13g02978 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 179 IPR035513 -
Bva13g02978 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02978 Bva-Chr13 21303059 21304106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02978 14 180 Carbohydrate Esterase AT3G14310 30.857 6.31e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02978 - - qsu:112006490 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02978 13 21303059 21304106 Bva13g02978 13 21303059 21304106 ECH