Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02967 ATGTCCTCGGCAACTTGGATCTCTTCCCTCTCGTGTTCATTACCTGCGACAGGAACCTCAAGGGACACAGTTGTTTCAACTCTTTCTCAGTGGCTAAGATTTGTTTTTCTCACCCCCTGCCCTCAAAGAGCTCTCTTGTCTGCTGTCGACATCTTATTCTTGCTCATCCTCTTTGTCTTTGCCCTTAAGAAGCTCTATTGTAGGTTCACCTCCAACGTTGGCCCCACCACTGAACTCAACAAGCCCTTGATCAGAAATAACAGAGCCTATGTTAGAACATCTATATGGTTTAAGCTTACTCTAACTGTAACGGGTGTTTTAGCTATTTTGTACACTGTCACGTGCGTTCTGTTACTTACCGGAGCCACTAAAGTACCATGGAAGTTAGTTGATGGACTATTTTGGTTGGTTCAGGGCTTAACTCATGCAGTCCTCGCAATCCTAATCATCCACGAAAAAAGATTTCAAGCTCATGCTCACCCAATATCACTTCGGGTTTACTGGATTGCCAACTTCATTCTCATTTCTCTGTTTACAGCGTCTGGGATTATACGTTTTGTCTCTGTCGAAGAAACCCAAGACTTCAGCTTTAAAGTGGATGATAcagtttcatttatttcttttcctctgtCACTCTTTCTCCTATTGGCTGCCATTAAAGGAACAACTGGAATAAGTTCCACTGAAGAAACGCAGCCACTTATTGATGATACTACTCTGGGCAAATCCAATGTTACCGGCTTTGCTTCAGCTTCTATTATATCAAAGGCCTTTTGGCTTTGGATAAACCCCTTATTGAGTAAAGGGTACAAGTCGCCGCTCAGTATTGATGAAGTTCCTTCACTTTCACCAGAACACAGAGCAGAGAAAATGTCGGCTTTGTTCGAATCGAAATGGCCTAAGCCGCAAGAAAGGTCGAATCACCCAGTTCGAACCACATTGCTAAGATGCTTCTGGAAGGAAATAGCCTTCACTGCCTTCCTTGCAATTGTTCGTCTCTGTGTCATGTTTGTGGGACCAGTTCTGATACAGAGTTTCGTTGACTACACATCAGGGAAGAGAAGGTCTGCATATGAAGGATATTACCTCGTGTTAATTCTCCTCGTTGCAAAATTCATAGAAGTGTTGACCACCCATCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATTAGGTGCACTCTCATCACTTCTCTGTACAAGAAAGGGCTAAGGCTATCATGCTCTTCTCGGCAGGACCATGGAGTTGGAGCTATAGTGAATTACATGGCTGTTGATGCTCAACAACTCTCTGATATGATGCTTCAGCTACATGCTGTGTGGATGGTGCCACTTCAAGTTGGCATTGCCTTATTTCTCCTTTACCGGTATCTGGGTTCCTCTGTGGTTGCAGCGTTGCTTGGAGTTTTGGCTGTTCTCGTGTTCGTTGTGTTTGGTACTAAAAGAAACAACCGTTATCAATTCAATGCAATGAGGAGCCGTGATTCAAGAATGAAAGCTGTGAATGAGATGCTGAATTACATGCGTGTGATAAAGTTCCAGGCTTGGGAAGAGCATTTCAACAAGAGAATTCTGGGTTTCCGTAAATCAGAATTTGAATGGATTTCCAAGTTCATGTACTCAATTTCTGGCAATATTGTAGTGATGTGGAGCACACCATTAATGATATCGACTCTCACGTTTGCTGCCGCAATTTGGTTTGGAGTTCCGCTTGATGCAGGGACCGTTTTCACGACCACAACAATCTTCAAAATCTTGCAGGAACCCATTAGGACCTTCCCACAGTCTATGATCTCTCTTTCACAGGCGATGATATCACTGGGTAGGCTGGACAAGTACATGATGAGTAGGGAATTGTCAATTGATTCGATGGAGAGAGGAGAAGGTTGTGGTGGAGGAGTTGCTGTGGAGATACAAGATGGGAACTTTAGCTGGGATGACGAAAATGGGGAGAGGGActtgaaaaatatcaatttgcAGATCAAAAAAGGGGAGCTTACTGCTGTTGTTGGAACTGTGGGCTCAGGAAAATCTTCTCTCTTAGCATCAATTCTTGGTGAGATGCACAGAATATCTGGGAAGGTTCGAGTTTGTGGGAGCACTGCCTATGTAGCACAAACATCTTGGATACAAAATGGGACCATTCAGGAGAACATCCTCTATGGTTTACCAATGAACAGACAAAAGTACAATGAAGTAATCAAGGTTTGTTGTCTGGAGAAAGACTTGGAGATGATGGAGGATGGGGATCAGACAGAGATAGGAGAGCGTGGCATCAACCTTAGTGGAGGTCAGAAGCAGCGGATACAACTAGCCAGGGCTGTATATCAAGACTGTGATATATATCTTCTCGACGATGTCTTTAGTGCTGTTGATGCACATACTGGCTCTGAAATATTCAAGGAATGCGTGAGGAGAGCTCTCAAAGGCAAGACCGTTATTCTTGTAACACACCAAGTAGACTTCTTGCATAATATTGATCTTATACTGGTGATGAGAGATGGTATGATAGTCCAATCAGGGAAGTACAAGGAGCTACTTGATTCTGGGATGGATTTTGGAGCTCTGGTTGCTGCACATGAAACCTCAATGGAACTAGTAGAACAAGGTGCAGAGGGTGTGGTAGCGGCTGGTGAAAATTCTCCTAGACCAGCCAATTCCCCAAGAAGGCTACCTTCTAACCGGGAAACCAATGGCGAAAGCAACTCCCTAGACCAGGCCAAGTCTGGGAAGGAAAGTTCTAAACTcatcaaagaagaagaaagagaaactgGCAGAGTGAGTTTGCATATTTATAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCGCTATAGGAGCattgcttctttctttgttatggCAAGGATCTTTGATGGCCGGCGATTATTGGTTGGCATATGAAACCTCGGAGGAGCGAGCTCAAATTTTCAATCCTTCTAAGTTTATTTCCGTCTATGCAATTATATCTGCAATTTCAGTTGTTTTGGTTGTGATAAGATCCTTCTCCTTCACAATCATGGGGCTTAACACAGCACAGATTTTCTTCACGCAAATTCTTTATAGCATCTTGCATGCACCCATGTCTTTCTTTGACACTACGCCTTCAGGAAGAATTCTAAGCAGGGTATCCACAGATCAGTTCAACGTTGATGTCCTCCTCCCCTTGTTCGTGAGCATTGTTATCGCTATGTACATTACAGTGATCAGCATCTTCATTGTTACATGTCAAAATGCCTGGCCAACAGTgttcttgttaattcctcttaTTTGGTTTAATATATGGTACCGGGGTTATTTCCTAGCTTCGTCTCGTGAATTAACTCGACTCGATCAAATTACAAAGGCACCTGTCATTCACCACTTCTCAGAAAGCATTTCAGGGGTAATGACAATCCGTGCATTCAGAAAGCAGGGGAGATTTACtgaagaaaatgttaaaagagTGAATGCCAATCTGCGAATGGATTTCCATAACAATGGTTCCAATGAGTGGTTGGGTTTCCGCTTAGAATTTCTTGGGAGCTTGGTTTGCTGCCTTTCTGCTTTGTTCATGATCTTGTTACCCAGCAGCGTCATACGGCCAGAAAACGTGGGTTTATCACTCTCCTACGGATTGTCCCTAAATGGTGTCCTGTTCTGGGCTATATACATGAGCTGTTTCATTGAGAACAAACTGGTATCTGTTGAGAGGATAAAACAGTTCACGAATATTCCTTCAGAAGCAACATGGAATCTTAAAGATCGTCTTCCTCCTCCAAGTTGGCCTGCCCGTGGTGACGTTGATGTCAAGGACTTGCAGGTCAGATATCGTCCAAACACTCCTCTGGTTCTTAAAGGCCTGACACTAAGCATCAGTGGCGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGCGGAAAATCAACTCTGATTCAAGTATTTTTCAGGCTGGTGGAACCTTCAGGAGGGAAAATAATCATCGATGGCATTGACATATCTGCGTTGGGGCTTCAAGATCTCAGATCTAGATTTGGTATCATTCCCCAAGAGCCTGTCCTCTTTGAAGGGACTGTCAGAAGTAATATTGACCCAATTGGACAATATACTGATGAAGAGATATGGAAGAGCCTAGAACGCTGTCAGCTAAAGGATGCAGTGGCAGCTAAGCCTAACAAACTTGACTCTCTTGTGGTTGATAATGGAGAGAATTGGAGTGTTGGGCAGAGGCAGTTGCTTTGTTTGGGGAGGGTTATACTCAAGAGAAGCCGGCTCTTGTTTATGGATGAAGCAACAGCCTCTGTTGATTCTAAGACTGATAGTGTAATTCAGAAGATCATCAGAGAGGATTTTGCAGCTTGTACCATTATCAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGATAGGGTTTTAGTCATAGATGCAGGGCGAGCAAAAGAATTTGAGAAACCTTCTAACTTGCTACAGAGGCAATCGCTGTTTGGGGCATTAGTGCAGGAATATGCCAATCGCTCCATTggattata 4517 0.4257 MSSATWISSLSCSLPATGTSRDTVVSTLSQWLRFVFLTPCPQRALLSAVDILFLLILFVFALKKLYCRFTSNVGPTTELNKPLIRNNRAYVRTSIWFKLTLTVTGVLAILYTVTCVLLLTGATKVPWKLVDGLFWLVQGLTHAVLAILIIHEKRFQAHAHPISLRVYWIANFILISLFTASGIIRFVSVEETQDFSFKVDDTVSFISFPLSLFLLLAAIKGTTGISSTEETQPLIDDTTLGKSNVTGFASASIISKAFWLWINPLLSKGYKSPLSIDEVPSLSPEHRAEKMSALFESKWPKPQERSNHPVRTTLLRCFWKEIAFTAFLAIVRLCVMFVGPVLIQSFVDYTSGKRRSAYEGYYLVLILLVAKFIEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSSRQDHGVGAIVNYMAVDAQQLSDMMLQLHAVWMVPLQVGIALFLLYRYLGSSVVAALLGVLAVLVFVVFGTKRNNRYQFNAMRSRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRILGFRKSEFEWISKFMYSISGNIVVMWSTPLMISTLTFAAAIWFGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDKYMMSRELSIDSMERGEGCGGGVAVEIQDGNFSWDDENGERDLKNINLQIKKGELTAVVGTVGSGKSSLLASILGEMHRISGKVRVCGSTAYVAQTSWIQNGTIQENILYGLPMNRQKYNEVIKVCCLEKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRRALKGKTVILVTHQVDFLHNIDLILVMRDGMIVQSGKYKELLDSGMDFGALVAAHETSMELVEQGAEGVVAAGENSPRPANSPRRLPSNRETNGESNSLDQAKSGKESSKLIKEEERETGRVSLHIYKLYCTEAFGWWGAIGALLLSLLWQGSLMAGDYWLAYETSEERAQIFNPSKFISVYAIISAISVVLVVIRSFSFTIMGLNTAQIFFTQILYSILHAPMSFFDTTPSGRILSRVSTDQFNVDVLLPLFVSIVIAMYITVISIFIVTCQNAWPTVFLLIPLIWFNIWYRGYFLASSRELTRLDQITKAPVIHHFSESISGVMTIRAFRKQGRFTEENVKRVNANLRMDFHNNGSNEWLGFRLEFLGSLVCCLSALFMILLPSSVIRPENVGLSLSYGLSLNGVLFWAIYMSCFIENKLVSVERIKQFTNIPSEATWNLKDRLPPPSWPARGDVDVKDLQVRYRPNTPLVLKGLTLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGIDISALGLQDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEEIWKSLERCQLKDAVAAKPNKLDSLVVDNGENWSVGQRQLLCLGRVILKRSRLLFMDEATASVDSKTDSVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFEKPSNLLQRQSLFGALVQEYANRSIGL 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02967 1505 Gene3D - 1247 1496 IPR027417 -
Bva13g02967 1505 Pfam ABC transporter 655 788 IPR003439 GO:0005524
Bva13g02967 1505 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Bva13g02967 1505 Pfam ABC transporter transmembrane region 979 1191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g02967 1505 Pfam ABC transporter transmembrane region 324 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g02967 1505 SUPERFAMILY ABC transporter transmembrane region 314 615 IPR036640 GO:0005524|GO:0016021
Bva13g02967 1505 CDD ABCC_MRP_domain2 1261 1481 - -
Bva13g02967 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1497 IPR003439 GO:0005524
Bva13g02967 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 947 1226 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g02967 1505 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Bva13g02967 1505 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Bva13g02967 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Bva13g02967 1505 Gene3D - 620 876 IPR027417 -
Bva13g02967 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1503 - -
Bva13g02967 1505 CDD ABCC_MRP_domain1 637 836 - -
Bva13g02967 1505 SUPERFAMILY ABC transporter transmembrane region 943 1243 IPR036640 GO:0005524|GO:0016021
Bva13g02967 1505 Gene3D ABC transporter type 1, transmembrane domain 311 619 IPR036640 GO:0005524|GO:0016021
Bva13g02967 1505 Gene3D ABC transporter type 1, transmembrane domain 908 1244 IPR036640 GO:0005524|GO:0016021
Bva13g02967 1505 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 88 1503 - -
Bva13g02967 1505 MobiDBLite consensus disorder prediction 887 911 - -
Bva13g02967 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva13g02967 1505 MobiDBLite consensus disorder prediction 876 918 - -
Bva13g02967 1505 SMART AAA_5 1289 1482 IPR003593 -
Bva13g02967 1505 SMART AAA_5 664 845 IPR003593 -
Bva13g02967 1505 CDD ABC_6TM_ABCC_D2 947 1238 IPR044726 GO:0140359
Bva13g02967 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 857 IPR027417 -
Bva13g02967 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02967 Bva-Chr13 21255241 21262193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02967 637 1496 Calmodulin-binding Proteins AT2G36910 25.189 3.12e-65 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02967 13 21255241 21262193 Bva13g02967 13 21255241 21262193 ECH