Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02962 ATGGTTGAAACCAGACGCAGCTCCTCTTCATCTAAGCGCTCTCTCTCTTCACCTCCTCCTTCCAACTCCAAACGATCTaagGTGTCCGAGGATGCGTCATCGACAGCTCTGCCGTCATCGGCAATTCTTGGTCCGGTCAACGAATCTCGAAGTGAATCTCAAGAACCGGGGCTACCATCGTCTGATCTGCCAGAGACCGAATCTCTGAAGGCTGTAGACCCGTTTGATGAGATGTTGCCTGAGAAATCTCCTGTTGTGCCTGAAGTAGACGAGGCTTTGGTGTCGCCACAGTCTTTAGGCGAAACTGCTGTGGATGCGGAGAAACCAAAGGTTGTTCGCTCGGCGGCGCTTCGTGGGTCAAAGAAACGGtcaacaaaatcaacaaaatcaaactcCACGGCTGCATGGGGAAAACTCCTTTCTCAGTCCTCTCAGAATCCTCACCTGTCAATGTGTGATTCTCCCTTCATTGTTGGTCAAGGCAAACAATGTAATTTGCGTATTAAAGACCCAGATGTTAGTAGCATTTTGTGCAAGTTGAAGCACATAGAGCATGGAGGTTCATCTATTGCTTTACTGGAAATCTCGGGAAATAAAGGTGTTGTCCAAGTTAATGGCAAGATTCATCGAAAAAATTCCCGTGTGCTCTTAAGTGGAGGTGATGAGGTGGTCTTCAGTTCATCTGGCAAGAATGCATATatttttcaGCAGCTCACCAACAATAATGTAGCTGCTTCCGGCATACCTCCTGTGAGTATTTTAGAAGCCCAGAATGCTTCACTAAAGGGAATTCATATTGAAACAAGATCTGGGGACCAGTCAGCTGTTGCTGGAGCATCCATATTAGCGTCTTTATCTAATCAACATAAAGATTTATCTCTCCTTTCACCACCTTCTAAAACTGGCAAGGATCCACAGATTAATGAGGTTTCTTTGCTACCTTCTGCCCATGGTGATGATGAGACTCTTGACAATATGAAGGATGCCACCAATAATGATCTTCCCGCCGCTGTTGTTTCAAATGATAAAACTGTTCTTGCATCTTCTACAACTGCCAATGAAAACCCTAGCCTTGACAGCAATGAGATAGATGCTACAATGGATGCGGATGTGGGAAAGATGTTGGAAGATCGAAGGGATTTAAGAGAACTCCTGAAGGATGTTGATGCCCCAACAATCTTGGCGTCTGCCAGGCGGCAAGCCTTTAAAGACAGTTTACAGCAAGGAATACTCCATCCTGATGATATCGGCATCTCATTTGAAAGTTTCCCATATTTTTTAAGTGATACAACGAAGAATGTTTTGATCGCTTCCACATACATTCATTTGAAGGGCAACagttttgtaaaatatgcTTCTGATCTGCCTTCAGTGTGCCCCCGGATATTATTATCTGGTCCTGCAGGTTCTGAAATATATCAGGAAACTTTGTCCAAAGCACTTGCCAAACATTTTGGCGCCAGACTACTAATAGTGGATTCTCTATCAATGCCTAGCgtAACACTCCTAAAGGATGCTGATTCTGTTAAAGAAATTTCAAGGTCTGAAAGAACATCTGTGTTTGCAAAGCGAAGCACACAAGCTACTGCACTACAGAATAAGAAACCAACTTCTAGCGTTGATGCTGATATTTTAGGTGGATCCACATTAAGTTCACAAGCTATGCTTAAGCAGGAGGTATCTACTGCATCATCAAAGGGCAGTGCTCTTAAAACAGGTGATCGGGTAAAGTTTGTTGGTAACTTGACTTCTGTCTCATCGATACAAAATTGTCCTTCAAGGGGACCAAGCATTGGCTCTCGAGGAAAAGTTCTCCTTGCTTTTGAGGATAATGGCTTGTCAAAAATTGGAGTTCGTTTTGATAAATCAATTCCAGATGGCAACGATCTTGGAGGCCTTTGTGAAGATGATCGTGGTTTCTTTTGTTCCGCTAATCATTTGCAAAGATTAGATGGTTCTGGTGGGGATGACCTTGACAAGCTTGCTATTAACGAAATCTTTGAGGTTGCTTTCAATCAGAGTAAAAGTGGTCCACTTGTGGTTTTTGTGAAAGACATAGAGAAAGCGATGATGGACAACCGCAAAGAAAAGGCCCACCCTGGTGGTCTTCTGTTTACAAAATTTGGGAGCAACCAGACAGCACTGCTTGATCTTGCTTTTCCAGATAACTTCAGTAGCAGGCTCCATGATAGGAACAAAGAAACCCCCAAAGCTATGAAGCAGCTTACTCGCCTCTTCCCTAACAAGATTACCATACAACTGCCTCAGGATGAGGGTTTGCTTTCCGATTGGAAGCAGCAACTAGAACGTGATATTGAAACTATGAAAGCTCAGTCAAATGTTGTCAGCATTCGCTCGgttCTAAGTAGAATTGGAATTGAATGCCCTGACCCGGAGACTCTTTGCATCAAAGATCAAGCTCTAACCACTGAAAGTGTGGAAAAAATTATTGGCTGGGCTCTAAGTCACCATTTCATGGATTCTGCTCAAGATTCAATAAAAGACTCTAAACTTGTCATATCCACTGAAAGCATTAAGTATGGGCTGAACATTCTACAGGGTATTCAAAGTGAAAACAAGAACTTGAAGAAATCCCTTAAGGATGTGGTTACCGAGAatgaatttgagaaaaaactGCTTTCCGATGTTATTCCGCCAAGTGATATTGGAGTGACATTTGATGATATTGGAGCTTTAGAAAATGTCAAGGACACCTTGAAGGAATTAGTCATGCTTCCTCTCCAGAGGCCTGAGTTGTTTGGCAAAGGACAGTTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCCGGTACTGGGAAAACAATGCTAGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATTTCCATGTCAAGTATTACTTCAAAGTGGTTTGGTGAAGGGGAGAAGTACGTCAAGGCTGTCTTTTCTCTAGCCAGCAAAATTGCTCCTagtgttatttttgttgatgagGTTGATAGCATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTGAACTGGGATGGTCTGCGTACAAAAGATAAAGAGCGAATACTAGTTCTTGCTGCTACAAATAGGCCTTTTGATCTTGATGAGGCTGTAATTAGGAGGCTTCCGCGGAGATTGATGGTTAATTTACCAGAGGCTCCCAACAGAGAAAAAATTCTCAGTGTCATTTTAGCCAAAGAAGATTTAGCATCCGACGTGGATTTGGAAGCAGTAGCAAACATGACTGATGGATATTCTGGCAGTGACTTGAAGAATCTGTGTGTCACAGCGGCGCACTGTCCAATTAGGGAGATTttggagaaggaaaaaaagGAGAGAAATCTTGCTTTAGCAGAGAGCAAACCTTCACCTCCATTGTGTAGCAGTGCCGACATTCGCCCCTTaaagatggatgattttagATACGCACATGAGCAGGTGTGCGCAAGCGTGTCGTCGGAGTCAACAAATATGAATGAGCTGCTACAATGGAATGACCTTTATGGAGAAGGTGGATCAAGAAAGATGAGATCTTTGAGCTATTTCATGTA 3590 0.4198 MVETRRSSSSSKRSLSSPPPSNSKRSKVSEDASSTALPSSAILGPVNESRSESQEPGLPSSDLPETESLKAVDPFDEMLPEKSPVVPEVDEALVSPQSLGETAVDAEKPKVVRSAALRGSKKRSTKSTKSNSTAAWGKLLSQSSQNPHLSMCDSPFIVGQGKQCNLRIKDPDVSSILCKLKHIEHGGSSIALLEISGNKGVVQVNGKIHRKNSRVLLSGGDEVVFSSSGKNAYIFQQLTNNNVAASGIPPVSILEAQNASLKGIHIETRSGDQSAVAGASILASLSNQHKDLSLLSPPSKTGKDPQINEVSLLPSAHGDDETLDNMKDATNNDLPAAVVSNDKTVLASSTTANENPSLDSNEIDATMDADVGKMLEDRRDLRELLKDVDAPTILASARRQAFKDSLQQGILHPDDIGISFESFPYFLSDTTKNVLIASTYIHLKGNSFVKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSMPSVTLLKDADSVKEISRSERTSVFAKRSTQATALQNKKPTSSVDADILGGSTLSSQAMLKQEVSTASSKGSALKTGDRVKFVGNLTSVSSIQNCPSRGPSIGSRGKVLLAFEDNGLSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLQRLDGSGGDDLDKLAINEIFEVAFNQSKSGPLVVFVKDIEKAMMDNRKEKAHPGGLLFTKFGSNQTALLDLAFPDNFSSRLHDRNKETPKAMKQLTRLFPNKITIQLPQDEGLLSDWKQQLERDIETMKAQSNVVSIRSVLSRIGIECPDPETLCIKDQALTTESVEKIIGWALSHHFMDSAQDSIKDSKLVISTESIKYGLNILQGIQSENKNLKKSLKDVVTENEFEKKLLSDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPEAPNREKILSVILAKEDLASDVDLEAVANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERNLALAESKPSPPLCSSADIRPLKMDDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02962 1196 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 369 693 - -
Bva13g02962 1196 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 370 - -
Bva13g02962 1196 MobiDBLite consensus disorder prediction 1 80 - -
Bva13g02962 1196 Gene3D - 890 1170 IPR027417 -
Bva13g02962 1196 Gene3D - 1064 1158 - -
Bva13g02962 1196 Pfam ATPase family associated with various cellular activities (AAA) 932 1061 IPR003959 GO:0005524|GO:0016887
Bva13g02962 1196 MobiDBLite consensus disorder prediction 115 136 - -
Bva13g02962 1196 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 709 1196 - -
Bva13g02962 1196 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 709 1196 - -
Bva13g02962 1196 SUPERFAMILY SMAD/FHA domain 136 228 IPR008984 GO:0005515
Bva13g02962 1196 Pfam AAA+ lid domain 1085 1121 IPR041569 -
Bva13g02962 1196 ProSitePatterns AAA-protein family signature. 1035 1054 IPR003960 GO:0005524|GO:0016887
Bva13g02962 1196 Coils Coil 852 872 - -
Bva13g02962 1196 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 370 - -
Bva13g02962 1196 SMART AAA_5 928 1065 IPR003593 -
Bva13g02962 1196 Gene3D - 135 245 - -
Bva13g02962 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1168 IPR027417 -
Bva13g02962 1196 CDD AAA 930 1063 - -
Bva13g02962 1196 CDD FHA 153 235 IPR000253 GO:0005515
Bva13g02962 1196 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 369 693 - -
Bva13g02962 1196 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02962 Bva-Chr13 21224547 21234819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02962 891 1137 Calmodulin-binding Proteins AT3G56690 40.476 1.35e-41 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02962 13 21224547 21234819 Bva13g02962 13 21224547 21234819 ECH