Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02942 ATGAAGAGGAGAAGCCACAAGAGGAGCATCGGCGACAACAGTAGGAGAAAGGAGGGTAGCAAAATGAAGGGAACACTCTCTAGGCACTTGCAGGGTCAGCTAGGGCAAGTCTCCGTCTCTCGTTTCCAGAACCTTCTAGAAGctgaagttgaccaaaccaatcttccttcctcttcctctcGCGGCATGGACGATGTGCTCGATGTCAATGTGGATGACAAAGATTGCATCCTCAGCCAAGATTTCTTTTGCACTCCAGATTATATAACCCCAGATAATCAGCACATTTTCAACAGCTTGGATTGCAATAAGGAAAATATCCCTTGCCCCAAATCACCGGAGAAGCTAAAtacaacaaaaagtaaaagatgtCGATTGGATGCTGTCTCAATCAATCCGCTCAGCCCTACTTTGTCTGGTGGCCATCAACAAGTTGTGGAACTTGGAAAAGATTCTGTCGCTGATGAAGTAGACACTGAGAAAACAATAGGAGCTGGTAAACCAAAGACTCAAAACTATGTCTCCCATTCTGCAGTTGCCTTGCGTTGCAGGGTTATGCCCCCTCCCTGCATTAGGAACCCATACATGAAGGATGCTTGTGAAAAGAATACAGATCCTTTTGGATATCAGAGGTCAAAATGTGCAGGTCTCTTTCCTGCAACTATTGGTGGTGATGGACTTTCACGCTATTACGGTGAATTTCATGAGATTCAGaAAATTGGTGTTGGGAACTTTAGCTGCGTTTTCAAAGTTTTGAAGAGAATCGATGGTTGCTTGTATGCTGTGAAACAAAGCACAAGACAGTTGCATCAAGAAACAGAAAGGAGGAAAGCTTTGATGGAAGTTCAAGCTTTGGCTGCCATAGGGTCCCATGAGAACGTCGTGGGTTACTATTCTTCGTGGTTCGAAAATGAGCAGCTGTACATTCAGATGGAGCTTTGTGATCACAGCTTATCCATAAACAAAACTTCCACGTTGTTTACAGAAGGAGAAGttttaaaggcattacaacAGATTGCAAATGCATTGCAGTATATACACGGCAAAGGAATAGCTCATCTAGATGTAAAACCtgataatatttatgtaaaaaatggTGTTTATAAGCTTGGTGATTTTGGGTGTGCAACTCTTCTTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAAGAAATCTTGAATGAGGACTATGATCACCTTGACAAGGCTGATATCTTCTCCTTGGGAGCTTCTATTTATGAGCTCATTCGTGCATCGCCTTTGCCAGAATCAGGTTGTCAGTTTTCTAATCTTAAGGTGGGCAAGCTGCCACTTCTTCCTGGTCATTCTTTGCAATTCCAGAACTTGCTGAAGGTCATGATGGACCCAGATCCAGTTAAGCGACCTTCTACTAGAGAGCTATTGGAAAATCCCATCTTTGACAGGGCTTCAAGAAATGTGAAAGCCTA 1463 0.4094 MKRRSHKRSIGDNSRRKEGSKMKGTLSRHLQGQLGQVSVSRFQNLLEAEVDQTNLPSSSSRGMDDVLDVNVDDKDCILSQDFFCTPDYITPDNQHIFNSLDCNKENIPCPKSPEKLNTTKSKRCRLDAVSINPLSPTLSGGHQQVVELGKDSVADEVDTEKTIGAGKPKTQNYVSHSAVALRCRVMPPPCIRNPYMKDACEKNTDPFGYQRSKCAGLFPATIGGDGLSRYYGEFHEIQKIGVGNFSCVFKVLKRIDGCLYAVKQSTRQLHQETERRKALMEVQALAAIGSHENVVGYYSSWFENEQLYIQMELCDHSLSINKTSTLFTEGEVLKALQQIANALQYIHGKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNEDYDHLDKADIFSLGASIYELIRASPLPESGCQFSNLKVGKLPLLPGHSLQFQNLLKVMMDPDPVKRPSTRELLENPIFDRASRNVKA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02942 487 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 22 392 - -
Bva13g02942 487 ProSiteProfiles Protein kinase domain profile. 234 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02942 487 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524
Bva13g02942 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Bva13g02942 487 SMART serkin_6 234 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02942 487 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 405 481 - -
Bva13g02942 487 Gene3D Transferase(Phosphotransferase) domain 1 313 482 - -
Bva13g02942 487 MobiDBLite consensus disorder prediction 1 31 - -
Bva13g02942 487 Pfam Protein kinase domain 234 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02942 487 PANTHER BNAA08G27310D PROTEIN 22 392 - -
Bva13g02942 487 PANTHER BNAA08G27310D PROTEIN 405 481 - -
Bva13g02942 487 SUPERFAMILY Protein kinase-like (PK-like) 226 480 IPR011009 -
Bva13g02942 487 Gene3D Phosphorylase Kinase; domain 1 225 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02942 Bva-Chr13 21160427 21164242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02942 17 480 Core Cell Cycle Gene Families AT1G02970 60.752 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Bva13g02942 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02942 K06632 - gmx:547742 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02942 13 21160427 21164242 Bva13g02942 13 21160427 21164242 ECH