Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02940 ATGAGTGATAGCATAGGCAAAACCCCAAACAGGTACGATTTCACAGGTACAAGTAGCGGCTCTGGTTCTGCCCAAGATGTAGTCATTAAGCAGCAAGATCGATTGCTTCCAATAGCTAATGTGGGGAGAATAATGAAGCAGATTCTTCCCCCCAACGCCAAAATCTCcaaagaagccaaagaaaccATGCAAGAATGTGTCTCTGAGTTCATAAGCTTTGTTACTGGAGAAGCATCTGATAAGTGTCACAAGGAGAGGCGCAAGACAGTGAATGGCGATGATATTTGCTGGGCTTTGTCTGCTCTAGGGTTCGATGACTACACCGAGCCACTAAAAAGGTATTTGCATAAGTATAGGGAATCAGAAGGGGAAAGAGCTAACCAAAATAAAGCAAATAGtgaagaaaatgttgaaacaGATATTTATGCAGGTGAGCAACCAAGGAAAATTACTGctaattcctcgttgaagttCAACTTGACTGATGGGGACAATGATAATGGTTCTCAGTCCTGGAAATTTTGTAACTTCTA 533 0.3809 MSDSIGKTPNRYDFTGTSSGSGSAQDVVIKQQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKERRKTVNGDDICWALSALGFDDYTEPLKRYLHKYRESEGERANQNKANSEENVETDIYAGEQPRKITANSSLKFNLTDGDNDNGSQSWKFCNF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02940 177 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g02940 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 35 99 IPR003958 -
Bva13g02940 177 ProSitePatterns NF-YB/HAP3 subunit signature. 66 82 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva13g02940 177 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 15 155 - -
Bva13g02940 177 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 15 155 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva13g02940 177 PRINTS CCAAT-binding transcription factor subunit A signature 63 81 - -
Bva13g02940 177 PRINTS CCAAT-binding transcription factor subunit A signature 101 119 - -
Bva13g02940 177 PRINTS CCAAT-binding transcription factor subunit A signature 82 100 - -
Bva13g02940 177 SUPERFAMILY Histone-fold 32 140 IPR009072 GO:0046982
Bva13g02940 177 MobiDBLite consensus disorder prediction 120 145 - -
Bva13g02940 177 Gene3D Histone, subunit A 24 167 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02940 Bva-Chr13 21151452 21151985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02940 25 129 CCAAT-HAP3 Transcription Factor Family AT2G47810 77.143 4.00e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva13g02940 CBFD_NFYB_HMF 2.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02940 K08065 - vvi:104879763 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02940 13 21151452 21151985 Bva13g02940 13 21151452 21151985 ECH