Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02936 ATGGAGGTCTTAAAGGACGACTTTTCGGAGCTAGAGATTGGAAATTCGGTGGAGTCGTTCGAGAAGTTTTTGGTTTCGCAAAAGGAGCTCTTCCATAGCCAGATCGATGAGCTCCAGAAGATAGTTGTAAAGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCCAGGGATTTGTTAAATCCAAAGGCTGTGAATTACATGCAATCAGTTTTCTCCATTAAAGATGCAATTTCTAAGAAAGAATCTCGAGAGATCAATGCTTTATTTGGTGTTACAGTTACACAGGTTCGTGAATTTTTCACCATTCAGCGTTCGAGAGTGAGGAGACTAGTTCGGTCTTCGAAGGAGAGGGCCACAAGATCTAATTCCTGTGAAGAACCTCGTGATGAGTTCCCAACAAGCTCTGATCCTATGAGACCAATCAATCCAACTCCCTTAAATTCTGTTGGCCCCGCCAGTGTTGAAGAAGTGTCTTCAACACAGGAGAATGCATTGCCTGATTTAGATGACTTGGATAAACACTtcattgataatatttttagtcaaaTGAGAAAAGAGGAAACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTGAAAATACAGAATTCTTCAGTATTATGTTGGTTTTTAAGCAAAGGAGGTGGGATGATTTTAGCAGCTTGGTTGAGTGAAGCAGCTGTTGAAGAGCAAACGAGTGTTCTTGTTCTTATCTTGAAGGTTCTCTGTCATTTACCTCTACATAAAGCCCTTCCTGTACACATGTCAGCTATATTGCAGAGTGTTAATAGACTGCGGTTCTATAGGACATCAGACATATCAAACAGGGCAAGAGTTTTGTTATCAAAATGGAGCAAATCGTTAGCAAGGAACCAGGCACTAAAGAAACCCAATGGTGTTAAAGCTTCTATTGTTGCTCGAAATAAGCTGATGCTTACTGAGAGTATTGGTCAAATTATGGGCAATGAATCATGGCATTCAGATTTTGATGTTCCTGAAGACTTTCTTGCCCTCTCAAATGAAGCTTCTGATAATTCCAGGAAATCGGAAGCTCCACAAGATGTGAAACTATTGCCAGCCCCTCCAGATGATTCAAATAAGAAGCCAGCTCTTGGTGTATCTTCATCTTATAGGGAACGCAGAAAAGTGCAGTTGGTGGAGCAGCCAGGCCAAAAAACAGTGAACAGGAGCCCACAGGCCACAAGAGCAGCACCAAGCCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCCAAAATGCGTGCTTTATTTATGCAGAGCAAATATGGGAAAACTGGTTCATTGAGAGAAAGGAAACAGCCAACGCCTGATGGTCTGCATAATAAACCTTTGACAGATCAGGCTAGTGCCGTGGCTTCCCCATCGAAAGTTCCTGTTTTACCCAAAattgaggaagaaaagaaaccttTATTGCTTCCTTCGGATTCCTCCAAAACCTCGAATAAGCAGGAAGCTTCCATTGATTTAAAACTGGGAATGGATTTGAGGGAACCTATCTGGGAGAAGTGCACGAGGGTGCGAATTCCCTGGAACACACCGGCAGAAGTCAAACTTAACGATAATTGGAGGCTTGGTTCTGGTGAAAATAGCAAAGAGGTTGATGTCCAAAGAAACAGAAACCGCCGTGAGAAGGAAACTATTCATCAGACTGTTCAAGAGATACCCTCTAACCCCAAAGAGCCATGGGACTTGGAGATAGACTACGATGACACTTTGACCCCAGAAATTCCTATTGAGCAATTGCCAGATGGTGATAGTGCAGAAACAATTGCCAATAATCAAGAAGCAACGGCGGTAGCCACCTCATCTTCAAATGGTAATGAAATTGCTGCCGAACCTGATTTAGAGCTGCTTGCCGTACTTCTCCAAAATCCTCGCTTGGTATACGCCTTGACTTCTGGACAAGCTGGTAGTTTACCAAGTGAGGAAACCCTGAAGCTGCTTGACATGATTAAGAAAGGTGATGTGAAGTTGCCTGGAGATTTAAATGGCGTATCTGGAAATGCGCAGCAGAATGTGGATGTTTCTCTACCATCTCCAACTCCTTCTACCAATCCAAGAACGAGTGGATGGAGCACAGAAGCTGCAAAGAATCCTTTCTCACGGCAAAGTTCAATGCCTGACGGAATTCCCCACAGTTCTCCTGCAACAGTCATCACAAACTTGGCACAGCCTCTGAATCCATCTGCGGGCATTGCCGTGCTGCAACAGCCAAGAAATCTGCTGCCATTTCTATATTCACTGCCTCAGGAAGCTACTATTGTTCCTGAAAGGCAACTGCCATCTGCTTTTTCCTCCGCGCATAGTAGTCACCTCACCAATTCTCCAAGAATACAAACACCAACCTCAGATATAGGTTTAAACATGAAGACCATAATTACAGCAAATGCATCTGCAGTTAAATTATCCAGCGCTCATTCATCTTTAGCAATGGGGGTCGACGGCATCAGTAATGTAAAATCAATACATAATTTGAGTATGCAAGATGGATTGTCTGACCCTAATTCAATCCCACAATCCTTTGTGATGCCGTCGCCGACACCAATACCAACGCCGTCGCTTTCAGCCACACAGCCTCAGAGACAACACCTTATATTGCAGCAATCCCATTTCTCTGAAGCTTCCTATCATGCTCCTGCACACTCTTATCCACAACAAATTGAAAAACCAAACAACCTTCCTTTGTCAGACAATTGGAGAGCTAGGCAGGATGTGTCTTCCAATTATCATTCTCAACTAAATCAAAACAACTCCGACGCAATGTTTGGAGTATCTGTGCAATCTGATTCTTCTTGGGAGAGGAATGATTATGGGGGAAGAGGATTTGAATCATGGAGTCCAGAGAATAGTCCAAGTAGAAATCATGGGTATATTCCAGGAAGAAATTTACCTCAATCCAGAATGGATCCCGGGAGAAATTATAGGCCTGAATCTGAATGGCCAAGAGAACGGGGTTCTTCTGGGTATTTTAATCCTAGTAGGCAGGGTAACAGAAAGTGGCATGATTGGAGACAATG 3092 0.4288 MEVLKDDFSELEIGNSVESFEKFLVSQKELFHSQIDELQKIVVKQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREINALFGVTVTQVREFFTIQRSRVRRLVRSSKERATRSNSCEEPRDEFPTSSDPMRPINPTPLNSVGPASVEEVSSTQENALPDLDDLDKHFIDNIFSQMRKEETFSGQEKLMEWILKIQNSSVLCWFLSKGGGMILAAWLSEAAVEEQTSVLVLILKVLCHLPLHKALPVHMSAILQSVNRLRFYRTSDISNRARVLLSKWSKSLARNQALKKPNGVKASIVARNKLMLTESIGQIMGNESWHSDFDVPEDFLALSNEASDNSRKSEAPQDVKLLPAPPDDSNKKPALGVSSSYRERRKVQLVEQPGQKTVNRSPQATRAAPSQGRPMSADDIQKAKMRALFMQSKYGKTGSLRERKQPTPDGLHNKPLTDQASAVASPSKVPVLPKIEEEKKPLLLPSDSSKTSNKQEASIDLKLGMDLREPIWEKCTRVRIPWNTPAEVKLNDNWRLGSGENSKEVDVQRNRNRREKETIHQTVQEIPSNPKEPWDLEIDYDDTLTPEIPIEQLPDGDSAETIANNQEATAVATSSSNGNEIAAEPDLELLAVLLQNPRLVYALTSGQAGSLPSEETLKLLDMIKKGDVKLPGDLNGVSGNAQQNVDVSLPSPTPSTNPRTSGWSTEAAKNPFSRQSSMPDGIPHSSPATVITNLAQPLNPSAGIAVLQQPRNLLPFLYSLPQEATIVPERQLPSAFSSAHSSHLTNSPRIQTPTSDIGLNMKTIITANASAVKLSSAHSSLAMGVDGISNVKSIHNLSMQDGLSDPNSIPQSFVMPSPTPIPTPSLSATQPQRQHLILQQSHFSEASYHAPAHSYPQQIEKPNNLPLSDNWRARQDVSSNYHSQLNQNNSDAMFGVSVQSDSSWERNDYGGRGFESWSPENSPSRNHGYIPGRNLPQSRMDPGRNYRPESEWPRERGSSGYFNPSRQGNRKWHDWRQ 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02936 1030 MobiDBLite consensus disorder prediction 405 423 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 689 733 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 358 431 - -
Bva13g02936 1030 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Bva13g02936 1030 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1029 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 128 176 - -
Bva13g02936 1030 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1029 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 128 149 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 555 587 - -
Bva13g02936 1030 SMART HOX_1 68 130 IPR001356 GO:0003677
Bva13g02936 1030 MobiDBLite consensus disorder prediction 445 509 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 156 176 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 966 1030 - -
Bva13g02936 1030 MobiDBLite consensus disorder prediction 555 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02936 Bva-Chr13 21121393 21129595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02936 1 738 Homeobox Transcription Factor Family AT4G02560 49.938 0.0 685