Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02921 ATGAGCTCACTTAGCAATCCCAAAGATCGTCACGAACTTTTCAGGCGTGATGTTAAGCAAGTTGTGTGTTCAATCTGTGACACTGAGCAGGAGGTTGCCAAAATGTGTTCTAATTGTGGTGTCAACATGGGAGAATACTTTTGTGAGATTTGCAAATTCTACGATGATAATACAGATAAAGGGCAGTTCCATTGTGATGACTGTGGGATTTACAGggTTGGTGAACGTGATAACTTCTTTCACTGTCAAACGTGTGGATCTTGCTACGCGGTGAGCTTGCAAAACAATCACTTATGTGTGGAGAACTCAATGAAGAGATGCTGCCCTGTCTATTATGAGGCTTGTGCTTTGACCATTTTAATTGCTGATTTTGCTCAAGACTgttgtaatta 392 0.4005 MSSLSNPKDRHELFRRDVKQVVCSICDTEQEVAKMCSNCGVNMGEYFCEICKFYDDNTDKGQFHCDDCGIYRVGERDNFFHCQTCGSCYAVSLQNNHLCVENSMKRCCPVYYEACALTILIADFAQDCCN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02921 130 SUPERFAMILY CHY zinc finger-like 9 42 IPR037274 GO:0008270
Bva13g02921 130 SUPERFAMILY Zinc hairpin stack 44 101 IPR037275 -
Bva13g02921 130 ProSiteProfiles Zinc finger CTCHY-type profile. 43 107 IPR017921 -
Bva13g02921 130 PANTHER ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN 5 114 IPR031109 GO:0008270|GO:0016567
Bva13g02921 130 ProSiteProfiles Zinc finger CHY-type profile. 1 41 IPR008913 GO:0008270
Bva13g02921 130 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 5 114 - -
Bva13g02921 130 Pfam CHY zinc finger 9 53 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02921 Bva-Chr13 21051293 21052696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02921 11 110 C2H2 Transcription Factor Family AT3G18290 36.190 2.21e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02921 K10144 - psom:113349615 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02921 13 21051293 21052696 Bva13g02921 13 21051293 21052696 ECH