Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02912 ATGGCTTTCAATTTGAGCCATATTCATGAGAAATTGGGCGTTACTTCATCCCATGATGGTACTCCTGTGAATTCCATCACTCTATTTGTGCTCCTCCTTTGTGCTTGTGTTGTAATTGGGCATCTTCTGGAGAAGAGCAGATGGATGACTGAGTCCGTTGTTGCCCTTATTATTGGCCTATTTACTGGAATTATCATTCTACTGTCAACCGAGGGACAAAGTTCACAcatcttattatttaatgaagagcttttctttatatatcttCTTCCACCCATCATATTTAATGCGGGGTTCCAGGtgaaaaagaagcaattttTCCGGAATTTCATGCCAATAATTCTATATGGTGTTCTGGGGAGTATAATATCATTTCTCATTGTATCACTAGGTACATTACAGTTCTTCCAAACATTGGACGTTGGTTTGCTGGACTTGGGAGActattttgCACTGGGAGCAGTATTTTCTGCTACAGATTCTGTCTGCACATTGCAGGTGCTTAATCAGGAAGAGACACCCCTTCTATACAGTCTAGTTTTTGGAGAAGGCGTGGTCAATGATGCAACATCTGTGGTTCTTTTCAACGCAATCCAGAGATTTGACCTCTCTCACATCACCTCAGTCAATATCATGCAGTTTCTTgggaattttttatatttattcctgACAAGCACTCTGCTGGGAGTAGCAGTTGGCCTTCTTAGTGCctacattataaaaaagttGTATTTTGGCAGGCACTCAACTGACCGGGAAATTGCTCTTATGATCCTGATGGCTTACTTTTCTTATATGGTGTCCGAACTGCTTCATTTAAGTGGAATACTTACTGTGTTCTTTTGTGGGATTGTCATGTCACATTACACTTGGCATAATGTCACTGAAAATTCTAGAATCACAAGCAGACATGCTTTTGCAACTTTCTCATTTATGGCCGAGATATTCATCTTCCTATATGTTGGAATGGATGCCTTGGACATTGAGAAGTGGAAATTCGCAAGCAACAGTCCTTGGACATTTGTTGCTGCTAGTGCAATACTGCTTGGGTTGGTTCTTCTCGGAAGGGCAGCTTTTGTGTTTCCCCTATCATTTGTAGCCAACTTAACGAGGAAGTCCAAGTCTGAAAAGATTGGATTCAAGCAGCAGGTTGTAATATGGTGGGCTGGTCTCATGCGGGGAGCTGTCTCTTTCGCACTTGCATATAATAAGTTTACTAGCTCAGGGCATACTCAACTGCAAGGGAATGCAATCATGATTACCAGCACCATCACAGTTGTTCTCTTGACTAATGTGGTGGGTGGACTATTGACAAAGCCTCTAATAAGGTCCTTGCTAAATCCCCATCCCCATAGTTATTCAATCCATTCTGAGAAGAGTCTGTCACTGCCACTTCTGTTGAACGGACAAGAGTCGGTAGCTAACATGGATACAGGGAACCCCCTTGATTCAAATCACACTGTCCATTACTATTGGCGCATGTTTGACGATAAATTCATGCGTCCTGTGTTTGGCGGCAGGGGATTTGTTCCGTTTACTCCTTCACAAACAGACAGGGCTCTGTATTA 1568 0.4037 MAFNLSHIHEKLGVTSSHDGTPVNSITLFVLLLCACVVIGHLLEKSRWMTESVVALIIGLFTGIIILLSTEGQSSHILLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNFMPIILYGVLGSIISFLIVSLGTLQFFQTLDVGLLDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQRFDLSHITSVNIMQFLGNFLYLFLTSTLLGVAVGLLSAYIIKKLYFGRHSTDREIALMILMAYFSYMVSELLHLSGILTVFFCGIVMSHYTWHNVTENSRITSRHAFATFSFMAEIFIFLYVGMDALDIEKWKFASNSPWTFVAASAILLGLVLLGRAAFVFPLSFVANLTRKSKSEKIGFKQQVVIWWAGLMRGAVSFALAYNKFTSSGHTQLQGNAIMITSTITVVLLTNVVGGLLTKPLIRSLLNPHPHSYSIHSEKSLSLPLLLNGQESVANMDTGNPLDSNHTVHYYWRMFDDKFMRPVFGGRGFVPFTPSQTDRALY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02912 522 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva13g02912 522 Gene3D - 23 447 IPR038770 -
Bva13g02912 522 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g02912 522 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g02912 522 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g02912 522 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g02912 522 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva13g02912 522 PANTHER SODIUM/HYDROGEN EXCHANGER 10 517 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva13g02912 522 PANTHER SODIUM/HYDROGEN EXCHANGER 10 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02912 Bva-Chr13 21007917 21013341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02912 10 520 Antiporters AT3G05030 67.167 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02912 - K14724 qsu:112020558 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02912 13 21007917 21013341 Bva13g02912 13 21007917 21013341 ECH