Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02883 ATGAAGGAGAAAGCAGATTCCCCTGTTGGAGTTCTAGAGGACTATTTTAAGAGCTCAGCTTCAGAATCAGAAACAAGTTCTTCCAAAGAACCCATTGAAGATTCAGATGGTCAAGATAAGTCAAAAAATGGTTCTAGATGGCGTGGATTTATCCAATTATTCAGGACCAAATCAAAGAAACCCACATCCACATTGCATCCTCTCAGTGTTATGAAGCTGTCAAAAAGATTGAGCAGTAGTATGAGGGAGATTATAATGCCAAATTATCGTTTAGATACAGATTTGAACCAGCACTCTTCGCCATGGAAGATCTTTACCCAGCAGGAGATTCAAATTGCAACCAATAATTTCTGCCAAGAAAACTTGATTGGAAAGGGTGGATATGCTGAAGTCTACAAAGGGTGTTTGCCAAACGGTCAGCTCATAGCAATCAAACGGCTAACAAGAGGAACCCCAGATGAAATCATAGGGGACTTCTTATCAGAACTTGGCATAATGGCACATGTAAACCATCCAAACACTGCGAAGTTACTGGGCTATGGAGTTGAGGGTGGGATGCACCTTGTTCTTAAATTGTCTGAAAAAGGGAGCCTAACTTCTGTGCTTTATGGTTTGAAAGAGAAACTACCATGGTGTGTTAGGCACAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTTCACGAGGGCTGTCAAAGGAGAATTATCCATAGAGATATTAAGGCTGCAAATATCTTGCTGACAGAGGAATATGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTGCCAGAGAATTGCACTCACCACactgtttcaaaatttgaaggaacATTTGGCTATCTTGCCCCTGAATACTTACTCCATGGCATAGTAGACGAGAAAACAGATGTGTTTGCCTTTGGTGTGTTGTTGTTAGAATTGGTCACTGGACGGCGAGCACTGGATTACTCGCAGCAAAGCCTCGTTTTGTGGGCAAAACCATTGCTAAAGAAGAATGATATAATGGAGCTCATTGATCGTTCTCTTGAAAATGACTTTGACTCTCGGCAGATGAATCTCATGCTCTTGTCTGCCTCCTTATGCATACAACAGTCCTCAATCCGTCGCCCATCCATGAGACAGGTTTTGCAGCTTCTAAATGGTAATCTTAGTTGCTTTAAGTGTATGAAGAAAATTCGATTGCCATTTTTTCGAAAAGTTTTTGAAGAAGAACTTTTTGATATTGAGTA 1238 0.4006 MKEKADSPVGVLEDYFKSSASESETSSSKEPIEDSDGQDKSKNGSRWRGFIQLFRTKSKKPTSTLHPLSVMKLSKRLSSSMREIIMPNYRLDTDLNQHSSPWKIFTQQEIQIATNNFCQENLIGKGGYAEVYKGCLPNGQLIAIKRLTRGTPDEIIGDFLSELGIMAHVNHPNTAKLLGYGVEGGMHLVLKLSEKGSLTSVLYGLKEKLPWCVRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEEYEPQICDFGLAKWLPENCTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNDIMELIDRSLENDFDSRQMNLMLLSASLCIQQSSIRRPSMRQVLQLLNGNLSCFKCMKKIRLPFFRKVFEEELFDIE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02883 412 ProSiteProfiles Protein kinase domain profile. 117 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02883 412 Gene3D Phosphorylase Kinase; domain 1 88 191 - -
Bva13g02883 412 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 410 - -
Bva13g02883 412 MobiDBLite consensus disorder prediction 27 43 - -
Bva13g02883 412 SMART serkin_6 117 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02883 412 PANTHER OS08G0249100 PROTEIN 1 410 - -
Bva13g02883 412 Gene3D Transferase(Phosphotransferase) domain 1 194 394 - -
Bva13g02883 412 SUPERFAMILY Protein kinase-like (PK-like) 97 382 IPR011009 -
Bva13g02883 412 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Bva13g02883 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bva13g02883 412 Pfam Protein kinase domain 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02883 412 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02883 Bva-Chr13 20872645 20875415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02883 105 383 Trihelix Transcription Factor Family AT1G70460 42.268 1.27e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva13g02883 Pkinase 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02883 - - gmx:100780587 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02939 04 24839457 24842136 Bva13g02883 13 20872645 20875415 BWGD
Bva13g02883 13 20872645 20875415 Bva13g03370 13 23147264 23151140 ECH
Bva13g02883 13 20872645 20875415 Bva13g02883 13 20872645 20875415 ECH
Bva05g01937 05 14891321 14894826 Bva13g02883 13 20872645 20875415 ECH
Bva10g01592 10 10772235 10775549 Bva13g02883 13 20872645 20875415 ECH