Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02882 ATGTTGCTTCTTTTCTACCacctcctcttcttcttcactctCCTCACTTTCCCTCTCCCTTCCCTCTCCGCCAACGGCACCCTTCTCAATGTTACTTGCCCTCTCAACTTCACCGTCCTTCGCGACCTTTACGGCGGCGCAAAACCCTCGTTTGATTCCAGCAGCGGCTGCCAGTCTATCCGCCAAACCCTCCGTCTTGTTCAGTCTGACTATATACGACGCACTGGCTTCTTCCTCTCACCTCTCAACTCTTCTGAGGCTTGCTGGGACGCTTTCCAGTCTTTCGTCAATGAATTCGAACCCAATTTTAATGTCCGCTCCTCTTGTGGCTTCAATACCAGCTGGATTTCTCAGGGATGCGTGAACATCACGACCCGAAGTCAATTCGAACAATTGGTTCCCAATCGTGTTCTTCAAGATGTGCGGACGAATTGCAATCAATCCCTAGAAAACAATTCGCCCTGCGCTCTCTGTCTTACGAGCTTGTCGAGCTTGCAAGCTTCCTACTTGACGGGTCCCTCGATTGGGAACATCTTCCCTTGTACGTCTTATTCACTAATTTATGCCGCTGCCTTCGTTAATCAGTATGGGCCTACCGATCCAGGTACTGCTCAGTGCCTGTTCTCCCTGAAATTTACGTCGAAGGATTCCAACGGTAAGAAACGAAAGATTGTTATTGCGATCGTTGTGATTGTTTGTGTACTGGGTTTGTTTCTGGTAATTGGTGGGTTTTGGTATTATTGGAGATTgaccaagaagaagaagatgaggaaGAGAAATATTAGTACAACTGAGATGGCTTCTGGGTTGGATTCAATGAAAGGAAGTACTACTTTGATTAGGTACACATTTGATGACATTAAAAAAGCAACTAGGAACTTCTCTAGGGATAATATGATTGGCAGAGGGGGATATGGGAATGTGTATAAAGGGGTCTTACCTGATGGGAGTGAAGTTGCATTGAAAAGGTTCAAGAATTGTTCAGTTGCAGGTGATGCTAGTTTTACTCACGAAGTTCAGGTTATTGCAAGCGTTAGGCATGTCAATCTGGTTGCTTTGAGAGGTTATTGTACTGCTACAACTAATTTTGAAGGTCACCAGAGGATTATTGTTTGTGATTTGATGAAGAATGGGAGTCTTCATGATCATTTGTTTGGGTCAAATGGGAAGAAACTCAGTTGGCCTATGCGTCAACGTATTGCGCTAGGCACTGCAAGAGGATTGGCATATTTGCATTATGGGGCTCAACCAACTATCATTCATAGGGACATTAAAGCCAGCAatatacttctggatgagatgTTTGAAGCAAAGGTAGCTGATTTTGGACTTGCAAAGTTCAACCCTGAGGGAATGACTCATATGAGCACTAGGGTAGCTGGAACCATGGGGTATGTTGCTCCTGAATATGCATTGTATGGACAGTTGACTGAGAGAAGTGATGTCTTCAGTTTTGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAAGCTCTTCAAACAGACGAAGAGGGTCAACCTTCTGCTCTGACTGACTGGGCTTGGTCATTAGTTAGAACAGGTAGACCTTTAGATGTTATAGAAGATGGTTTGCCAGAACCGGGTTCACCTGAAGTTCTTGAGAAGTATGTGTTGATTGCTGTACTTTGTTCTCATCCTCAACTATATGCTAGGCCAACAATGGATCAGGTTGTGAAAATGATGGAGACGGAGACATCTGTTCCGTCAATACCAGAACGGCCAATTCCTCTTGTTGCCGAGAGGACTGATATTGAGAGATCAGTCAGCAATTGTGGCTCGGGCAACCTCTCTAGTCCAACAGGTTATCAAGCATATACATTTGGAAGTGAACTACAATCTTCCAGTTCTAAGGAAGAAGGAAGTACTGGTTCCAGAATAGTAAGTACAGATTG 1913 0.4313 MLLLFYHLLFFFTLLTFPLPSLSANGTLLNVTCPLNFTVLRDLYGGAKPSFDSSSGCQSIRQTLRLVQSDYIRRTGFFLSPLNSSEACWDAFQSFVNEFEPNFNVRSSCGFNTSWISQGCVNITTRSQFEQLVPNRVLQDVRTNCNQSLENNSPCALCLTSLSSLQASYLTGPSIGNIFPCTSYSLIYAAAFVNQYGPTDPGTAQCLFSLKFTSKDSNGKKRKIVIAIVVIVCVLGLFLVIGGFWYYWRLTKKKKMRKRNISTTEMASGLDSMKGSTTLIRYTFDDIKKATRNFSRDNMIGRGGYGNVYKGVLPDGSEVALKRFKNCSVAGDASFTHEVQVIASVRHVNLVALRGYCTATTNFEGHQRIIVCDLMKNGSLHDHLFGSNGKKLSWPMRQRIALGTARGLAYLHYGAQPTIIHRDIKASNILLDEMFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTDEEGQPSALTDWAWSLVRTGRPLDVIEDGLPEPGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETETSVPSIPERPIPLVAERTDIERSVSNCGSGNLSSPTGYQAYTFGSELQSSSSKEEGSTGSRIVSTD 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02882 637 MobiDBLite consensus disorder prediction 616 637 - -
Bva13g02882 637 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Bva13g02882 637 CDD STKc_IRAK 300 569 - -
Bva13g02882 637 Pfam Protein kinase domain 295 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02882 637 Gene3D Transferase(Phosphotransferase) domain 1 375 576 - -
Bva13g02882 637 SUPERFAMILY Protein kinase-like (PK-like) 278 583 IPR011009 -
Bva13g02882 637 Gene3D Phosphorylase Kinase; domain 1 251 373 - -
Bva13g02882 637 Pfam SPARK 30 170 IPR043891 -
Bva13g02882 637 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 23 616 - -
Bva13g02882 637 SMART serkin_6 294 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02882 637 PANTHER OS01G0253100 PROTEIN 23 616 IPR045271 GO:0004714|GO:0006468
Bva13g02882 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Bva13g02882 637 ProSiteProfiles Protein kinase domain profile. 294 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02882 Bva-Chr13 20867485 20869660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02882 1 617 Receptor kinase-like Gene Family AT2G48010 63.548 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bva13g02882 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02882 - - gmx:100794233 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02938 04 24833331 24835574 Bva13g02882 13 20867485 20869660 BWGD
Bva13g02882 13 20867485 20869660 Bva13g02882 13 20867485 20869660 ECH