Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02855 ATGACCATCTCAATGGTAATGTGTAGACCGGCACCAGTCAGAGAACCACTTATAAACATGCCTTCTGGTTCTAATGGTGGCCAAAGATTGAACTTGACCAACCGTACATGCCAGAAGGAGAAGGTAGTGTTGGTCATGGGGGCTACCGGCGCTGGCAAGTCAAGACTCTCGATCGACCTTGCCACCTATTTTCCGGCGGAAATCATAAACTCAGACAAAATACAAGTCTATGAAGGGCTTGACATAGTAACAAACAAAGTCACCAAAGAAGATCAACGCGGGGTGCCTCACCATTTGCTTGGAACACAAAACCCCGACTCAGAGTTCACCGCTGCTGATTTCTGTGACACGGCTTCACTTGCCGTTGAGACAATCACCGGTCTTGGACATCTCCCAATCATCGTCGGAGGATCTAATTCCTACATTGAAGCCCTAATCGACGACGATGACTATAGATTCCGATCAAGGTACGATTGCTGTTGTCTCTGGGTAGACGTATCGATGCCTGTTCTTCATCCCTATGTAGCAGAACGGGTTGATCAAATGTTTGATAAGGGAATGTTAAACGAATTGAGATCATTTTACAATCCCAATGGCGATTATTCTCGAGGGATTAGAAAAGCAATCGGAGTACCTGAATTCgatcaatattttcaaaacgAAGCCTTCGGGGACGAAGAAACCAGACACAGATTACTGCAACAAGCAATAAGTGAAGTGAAGGAGAATACGTGCAAATTGGCAACGAAACAATTGAGGAAGATTCATTGGCTCCGAAATGTTAAGAGGTGGAAGATTCACCGCCTAGATGCGACGCCGGTGTTTCAGAAGAAAGGCAAAGATGCAAATGAGTCATGGAAGAAGTTGGTGGCAGAGCCAAGTGCTAGAATCCTCGCGGAGTTTCTCTGCAATGTTAACACCACTAATGTCGATGCTAGCCTTAGATTGCCAGCCTTGGCGACTGCACTTGCCGCCGCTACATGCTA 986 0.4564 MTISMVMCRPAPVREPLINMPSGSNGGQRLNLTNRTCQKEKVVLVMGATGAGKSRLSIDLATYFPAEIINSDKIQVYEGLDIVTNKVTKEDQRGVPHHLLGTQNPDSEFTAADFCDTASLAVETITGLGHLPIIVGGSNSYIEALIDDDDYRFRSRYDCCCLWVDVSMPVLHPYVAERVDQMFDKGMLNELRSFYNPNGDYSRGIRKAIGVPEFDQYFQNEAFGDEETRHRLLQQAISEVKENTCKLATKQLRKIHWLRNVKRWKIHRLDATPVFQKKGKDANESWKKLVAEPSARILAEFLCNVNTTNVDASLRLPALATALAAATC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02855 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 150 IPR027417 -
Bva13g02855 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 168 266 - -
Bva13g02855 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 309 IPR039657 -
Bva13g02855 328 Gene3D - 39 302 IPR027417 -
Bva13g02855 328 Pfam IPP transferase 75 148 - -
Bva13g02855 328 Pfam IPP transferase 154 259 - -
Bva13g02855 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 31 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02855 Bva-Chr13 20708369 20709689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02855 155 302 C2H2 Transcription Factor Family AT2G27760 32.571 1.01e-20 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02918 04 24737927 24739446 Bva13g02855 13 20708369 20709689 BWGD
Bva13g02855 13 20708369 20709689 Bva13g02855 13 20708369 20709689 ECH