Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02854 ATGGAAGAACAAAGTAACCAGCAGAACACTCTGCAGCTGATGTTTAACTCTGAAGGAACCAACTATCATATCTCTCATTCTACTGAGGAAAATCCAAACCCACATTTTGTTGCAGCTGGAACTGGAAAGGACGAGAGCCAGTGGACCTTCCTCCCAAAACCATCTCATAGTTACGTTGAATTTCTTACAAAAGCCTCAACTTTTCTGCCAAAGACTACAACTGAAGAAGTGTTTGGGAGCAATTATTCATCTGTTGGTAGCATACGTGATGTTAATGACGTCAATCGAATAGACAGAAGCTTCTTCTATAGTGATCCGGCAAAAGCTTACACTTCCAACACTACGGATTCTTCTACTGATAAAGAAGATCGGACGCATGTGGGGTTTTGGATACCAGAGAAAGAAGGCGAGCAAGCAAATAAATTTGCATCTACGCAACATCATCTTCATGCTGAGGGTCATGCTTCGTGGGTAGCAGAAACAACCAGAGATAAGCTTGATCAAGGGGTCACTGTTGGTGCACCAGGTTTCCTTCCCAGATCACAATGCAGTAcatccaaaaagaaagaaaataaaacagatcGTCAACGCAGGCTGCGAATTAGTGAAAACGTCCGAGCCCTGCACGATTTGCTTCCAAATGCATTAGAGGGGAATCAAGCATACATACTGGATGACATCATTGACTATGTCAAATATTTGCAACTTCAAATAAAGGAATTAAGTGCAAGCAAATTGCAAGGTGAATCAATTTCTGTACCACTCACTTTTCATGAGGGTTTCGGCCATTACATTAACCAACAGATGTTGAATGAACCCTTGGAAGAGATGATGGGAAAGCTACTTGAGGAACATCCAGCGGCAGCCACACAGCTGTTGGAGAGTAGAGGCCTTTGCCTTCTGCCTATGACTTTAGTTGAAGACTTACGCCAAGGTATCAAGATGTTTGGTGGGATAAGTAATGGTTTTTA 971 0.415 MEEQSNQQNTLQLMFNSEGTNYHISHSTEENPNPHFVAAGTGKDESQWTFLPKPSHSYVEFLTKASTFLPKTTTEEVFGSNYSSVGSIRDVNDVNRIDRSFFYSDPAKAYTSNTTDSSTDKEDRTHVGFWIPEKEGEQANKFASTQHHLHAEGHASWVAETTRDKLDQGVTVGAPGFLPRSQCSTSKKKENKTDRQRRLRISENVRALHDLLPNALEGNQAYILDDIIDYVKYLQLQIKELSASKLQGESISVPLTFHEGFGHYINQQMLNEPLEEMMGKLLEEHPAAATQLLESRGLCLLPMTLVEDLRQGIKMFGGISNGF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02854 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Bva13g02854 323 CDD bHLH_AtbHLH_like 193 242 IPR045239 -
Bva13g02854 323 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 306 - -
Bva13g02854 323 MobiDBLite consensus disorder prediction 169 197 - -
Bva13g02854 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 246 IPR036638 GO:0046983
Bva13g02854 323 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 14 306 - -
Bva13g02854 323 Gene3D - 183 252 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02854 Bva-Chr13 20697892 20701477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02854 169 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 36.646 1.40e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02854 - - gmx:100788949 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02854 13 20697892 20701477 Bva13g02854 13 20697892 20701477 ECH