Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02851 ATGGCATCAAACTCAGGGTTTGCAGTGGCGCTACCAGAGATtcaaacaaggaaaagaaagcaatcTGATGATCAGAAGGAGTATAAGCATCCGTCAATTAGGAGGAGGAAAGATACTCTGTTTAAGAAATCGAGAGAACTTGCTATTAAGGGCGATGCGCAAGTTTGTTTAATCTGTATCGATCCCAATGGAGATATTGATGTATTTCCAGAGCCTAAGGAAGCTAAGGCCATGCTCCACAAGTACGTTGGAACCCatgataacaaaaataatgatcagattgataagataaaaagagaagcaGATCAAAAGAAGGCGTTGCTGAATCTACTGAATTCAAAGTTGGAGATTTTAGACGAGAGAATCCAGAAAATGAGCAACGAAGCTTCCTATTCTTGCAAGGATTTCGAGTATTGGAACAgttttcctcctcttcttgATGATTTGGACCACGTACTGCCAAGTGATAGCATTAGCCCTAGCTTCAATGCAGAGAATAATATTGATGATGGCGttttattacaagaattaCTTGGTATGTACGGTATCGCCGAATATAATGGACAAACGATCTCTTGGGTCCCGGAAATTGGTTGCTCTGACATCCCATTACTTGAGTGGGATAATGCAAGCCATGTAGCTGGGATCGGCGGCGGCGATAGGAACTCTGCATCGACTCGCACTGGTTCTGAAACGGTCCAGTTGCAGCAGACGGCAGTGCCAGTAGAGCACAATCTCGACTTGCTCTTTTATCAAGTTTG 761 0.389 MASNSGFAVALPEIQTRKRKQSDDQKEYKHPSIRRRKDTLFKKSRELAIKGDAQVCLICIDPNGDIDVFPEPKEAKAMLHKYVGTHDNKNNDQIDKIKREADQKKALLNLLNSKLEILDERIQKMSNEASYSCKDFEYWNSFPPLLDDLDHVLPSDSISPSFNAENNIDDGVLLQELLGMYGIAEYNGQTISWVPEIGCSDIPLLEWDNASHVAGIGGGDRNSASTRTGSETVQLQQTAVPVEHNLDLLFYQV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02851 253 Gene3D - 33 106 IPR036879 GO:0003677|GO:0046983
Bva13g02851 253 ProSiteProfiles MADS-box domain profile. 24 73 IPR002100 GO:0003677|GO:0046983
Bva13g02851 253 MobiDBLite consensus disorder prediction 16 32 - -
Bva13g02851 253 MobiDBLite consensus disorder prediction 1 32 - -
Bva13g02851 253 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 34 66 IPR002100 GO:0003677|GO:0046983
Bva13g02851 253 SUPERFAMILY SRF-like 25 90 IPR036879 GO:0003677|GO:0046983
Bva13g02851 253 Coils Coil 94 128 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02851 32 82 MADS-box Gene Family AT3G18650 42.308 6.55e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bva13g02851 SRF-TF 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02851 - K09264 pop:7486908 53.1434