Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva13g02818 | ATGCCTGCCACACTGCGAACTAAATATCTCAACCTTTGTTTCTCTAAGATCCTACGGCCATTGGAAGCTGATCAGTCCCCTCCCATGACCCCAATTCTATCAAACTCATCCTTACCTCATCACCACCGTGCCTCGCCACTTCCCATCAACAATAACTCATCATCGTCGCCCTCGTTTTTGATAAAGAATTTCAACTCACTCTACGAAGACTCCACGGCAGCCACCTCATCTTCTCTCTCAAGAACCTCCACAACCACTAGCGCCTATGAACCCGAACTCGAACGCGACCCCGAACCCGCCGACTTCGCCACCGTCTTCGCCTCCCAACggttcttcttctcctctcccGGCCGCTCCAACTCCATCATAGAATCCTCCAACGCTGAATGCACCACATCATCGCCGTCGTCATCGGAGACAAAGAGTGATCagaaaatcttcaatttcaacaaCAGCGTTGCCGTCCCAACTTACTCGCCGGACCCTTACCTTGACTTCCGGCGGTCCATGCAGGAGATGGTGGAGGCGCGTCCTGAACTAATGGACGTGAAATCCAATTGGGAAATCTTACACGAGCTTCTTCTCTGTTATCTTGCTCTCAACCCCAAGACCACCCACAACTACATCGTCAGTGCTTTTGCGGATCTTCTCGTTACCCTAATGTCATCGTCGCAGCCCAAACCCGACGAGCTGGGCCCCGGCGGCGGCGATGGTggata | 719 | 0.5007 | MPATLRTKYLNLCFSKILRPLEADQSPPMTPILSNSSLPHHHRASPLPINNNSSSSPSFLIKNFNSLYEDSTAATSSSLSRTSTTTSAYEPELERDPEPADFATVFASQRFFFSSPGRSNSIIESSNAECTTSSPSSSETKSDQKIFNFNNSVAVPTYSPDPYLDFRRSMQEMVEARPELMDVKSNWEILHELLLCYLALNPKTTHNYIVSAFADLLVTLMSSSQPKPDELGPGGGDGG | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva13g02818 | 239 | PANTHER | TRANSCRIPTION REPRESSOR OFP12 | 6 | 227 | - | - | |
| Bva13g02818 | 239 | Pfam | Transcriptional repressor, ovate | 159 | 220 | IPR006458 | - | |
| Bva13g02818 | 239 | MobiDBLite | consensus disorder prediction | 75 | 96 | - | - | |
| Bva13g02818 | 239 | MobiDBLite | consensus disorder prediction | 28 | 52 | - | - | |
| Bva13g02818 | 239 | MobiDBLite | consensus disorder prediction | 118 | 143 | - | - | |
| Bva13g02818 | 239 | MobiDBLite | consensus disorder prediction | 75 | 90 | - | - | |
| Bva13g02818 | 239 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 6 | 227 | IPR038933 | GO:0045892 | |
| Bva13g02818 | 239 | TIGRFAM | A_thal_3678: uncharacterized plant-specific domain TIGR01568 | 153 | 221 | IPR006458 | - | |
| Bva13g02818 | 239 | MobiDBLite | consensus disorder prediction | 25 | 52 | - | - | |
| Bva13g02818 | 239 | ProSiteProfiles | OVATE domain profile. | 155 | 219 | IPR006458 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva13g02818 | Bva-Chr13 | 20500204 | 20500923 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | OFP | Bva13g02818 | Ovate | 5.9e-24 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva13g02818 | - | - | aprc:113871147 | 239.195 |