Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02805 ATGGACACTGATGTGGACGTAAGAGATAGCTCGCTCATTCTGCTGAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTACTTTTGTGGGAAGGAGATGTATTGTCAAGGAACGATTCTCAAAGAAGTACCGGCATCCAACTTTGGATTCTAAACTTACACTTAAGCGCTTAAATGCGGAGGCTAGATGTCTGACGAAAGCAAGACGACTTGGGGTACCTACTCCAGTGCTGTACGCTGTGGATCCTGTGTTGCACACTTTAACATTTCAATATATTGAGGGTCCTTCGGTGAAAGatatatttcttgaatttgGGTTAAACGGTGTCTCTGAGGAGCAGCTGGACAATATTGCATCCCAAATTGGTGATGCAATTGGAAAATTGCATGATGGTGGTCTTATCCATGGTGACTTGACAACATCAAATATGTTACTTGCGAACGGTACCAATCAGCTGGTCCTTATTGACTTCGGTTTGAGCTTCACTTCAACCCTACCAGAAGATAAAGCTGTTGATTTATATGTACTGGAAAGAGCCCTTCTTTCAATGCATTCTTCATGTGGGAATGTGATGGATCGGATACTAGCCGCGTACCGCAAGTCATCAAAGCAGTGGTCATCCACTTTAAACAAGCTAGCCCAAGTGCGACAAAGAGGACGAAAGAGGACCatggttggatg 680 0.4279 MDTDVDVRDSSLILLKQGAEARVFESTFVGRRCIVKERFSKKYRHPTLDSKLTLKRLNAEARCLTKARRLGVPTPVLYAVDPVLHTLTFQYIEGPSVKDIFLEFGLNGVSEEQLDNIASQIGDAIGKLHDGGLIHGDLTTSNMLLANGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02805 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Bva13g02805 226 Gene3D Transferase(Phosphotransferase) domain 1 106 223 - -
Bva13g02805 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
Bva13g02805 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Bva13g02805 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Bva13g02805 226 Pfam Protein kinase domain 55 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02805 226 SUPERFAMILY Protein kinase-like (PK-like) 14 174 IPR011009 -
Bva13g02805 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02805 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02805 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 220 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02805 Bva-Chr13 20451202 20454249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02805 5 160 MAP Kinase Kinase Kinase AT5G66710 28.485 3.08e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Bva13g02805 Pkinase 5.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02805 K08851 - pop:7480688 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02805 13 20451202 20454249 Bva13g02805 13 20451202 20454249 ECH