Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02804 ATGGGTAACGCAGACTATGTGTATCCATCGTCGGTGATGAACGTGGAGAGTTCTCCCAGAGTGGCCATTCCACCACCGCAGCCATTCTTCAAGTCTCTGGGTTACTCTCTGAAAGAGACCTTCTTTCCCGATGATCCGTTAAGGCAATTCAAGAACAAGCCAGCTTCTAGAAAGTTTGTGCTTGGCCTTCAGTACTTCTTTCCAATCTTTGAATGGGCACCTCGCTACACTTTGCAGTTCTTGAAATCAGACATCATTTCTGGCATCACCATCGCCAGCTTGGCTATTCCCCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCCATACTCGGCTTGTACTCGAGCTTTATACCTCCGTTGATTTATGCCATGATGGGTAGCTCCAGGGATTTAGCGGTGGGAACGGTGGCGGTTGGGTCACTTCTCATGGGTTCTATGTTGGCTAATGTGGTCAATCCCAACGAGGATCCAAAGTTATATCTTCATCTTGCTTTTACGGCTACCTTCTTTGCTGGAGTAATACAAGCTTCGTTGGGCTTCTTTAGGTTAGGGTTTATCGTGGATTTTCTGTCGCATGCAACCATAGTAGGTTTCATGGGCGGAGCAGCCACCGTGGTTTCCCTGCAACAGCTAAAATCAATTCTTGGTCTTGAGCATTTCACCCACGGAGCTGACCTTGTGTCAGTGATGCGCTCCGTTTTTAGCCAAACACATAAGTGGAGGTGGGAAAGCGCGGTGTTAGGATGTGTCtttatcttcttccttcttatcACCAGATACTTTAGCAAAAGGCAACCAAAATTCTTTTGGGTGTCAGCGATGGCGCCGTTGACGTCCGTTATATTGGGAAGTCTGCTGGTGTATCTTACGCACGCCGAGAAGCACGGCGTTCAAGTGATAGGACAATTGAAGAAAGGGCTAAATCCACCAACCATCACGGATCTGGTATTCGTGTCGCCTTACCTAACGACAGCTATTAAAACTGGCGCTGTCACGGGAATCATAGCCCTCGCCGAAGGAATAGCAGTGGGGAGAAGCTTTGCAATGTTCAAAAATTACCATATCGATGGCAACAAAGAGATGATAGCTATTGGGAGCATGAACATAGTTGGCTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGGTCAGCTGTGAACTACAATGCAGGATGCAAGACTGCAGCATCAAACATTGTAATGGCAATTGCAGTGATGTTGACATTGTTATTTCTCACGCCATTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATAATTGTATCTGCAATGCTTGGCCTCATAGATTACGAAGCAGCCATCCACCTCTGGAAGATtgacaaatttgattttcttgtttgcttgAGTGCTTATGTTGGCGTCGTTTTTGGTAGCGTTCAACTTGGCCTTGTCATAGCAGTTGCAATTTCTGTGCTGAGGGTACTTCTATTTGTTGCAAGGCCAAGGACATATGTTCTCGGGAACATTCCAAATTCAGTGGTATATAGAAATGTTGAACAATatccaaatgccaagcatgtTCCTGGAATCTTAATTCTTGAGATTGATGCACCTATCTACTTCGCCAACGCCAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGACGAGGAAGACAGGGTTAAAGCTGCAGGGGAAGCCAGCTTGCAGTATGTTATAATGGACATGTCTGCTGTTGGAAATATTGATACAAGTGGAATAAGCATGCTTGAAGAAATCAAGAAGGTCACAGAAAGAAGAGAGCTACAACTTGTTTTGGTGAATCCTGGAAGCGAGGTGATGAAGAAGATCAGCAAATCCAAGTTTGTCGAGGGAATAGGTCAGAAATGGATCTATCTGACAGTTGAAGAGGCTGTGATAGCATGCAAAAACCCTACGAAAGATGAATCAGAAGCTTGGAACAGTGTTTG 1949 0.4454 MGNADYVYPSSVMNVESSPRVAIPPPQPFFKSLGYSLKETFFPDDPLRQFKNKPASRKFVLGLQYFFPIFEWAPRYTLQFLKSDIISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANVVNPNEDPKLYLHLAFTATFFAGVIQASLGFFRLGFIVDFLSHATIVGFMGGAATVVSLQQLKSILGLEHFTHGADLVSVMRSVFSQTHKWRWESAVLGCVFIFFLLITRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGQLKKGLNPPTITDLVFVSPYLTTAIKTGAVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGSMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFLVCLSAYVGVVFGSVQLGLVIAVAISVLRVLLFVARPRTYVLGNIPNSVVYRNVEQYPNAKHVPGILILEIDAPIYFANASYLRERITRWIDDEEDRVKAAGEASLQYVIMDMSAVGNIDTSGISMLEEIKKVTERRELQLVLVNPGSEVMKKISKSKFVEGIGQKWIYLTVEEAVIACKNPTKDESEAWNSV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02804 649 Pfam STAS domain 513 631 IPR002645 -
Bva13g02804 649 Gene3D STAS domain 492 638 IPR036513 -
Bva13g02804 649 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva13g02804 649 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 645 - -
Bva13g02804 649 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Bva13g02804 649 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Bva13g02804 649 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
Bva13g02804 649 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Bva13g02804 649 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Bva13g02804 649 PANTHER SULFATE TRANSPORTER 2 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02804 Bva-Chr13 20445574 20450339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02804 20 635 Inorganic Solute Cotransporters AT4G02700 69.368 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02804 K17471 - gmx:100791091 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02855 04 24456768 24461740 Bva13g02804 13 20445574 20450339 BWGD
Bva13g02804 13 20445574 20450339 Bva13g02804 13 20445574 20450339 ECH