Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02803 ATGGAGCTGTATGAAATTCTGGAACAGATTGGCCAAGGTTCCTTTGGTTCTGCTCTGCTTGTGAGACAcaaacatgaaaagaaaaaGTATGTACTCAAGAAGATCCGCCTTGCCCGCCAAACTGATAGGAATCGTAGATCTGCACTCCAGGATATGGAGCTTGTTTCTAAAGTGCGAAATCCATTTATTGTGGAGTATAAAGATTCCTGGGTGGAAAAGGTTGGTTTTGTATGCATTGTTATAGGCTACCGTGAAGAGGAGACATGTCGTTGTCATGTTCTGCTTGCTGCTAATACATTGCTCATATACTTGGTTTTGTTATACAGGGCGGAAGCTATAAAAAAGGCTAACGGCGTTCATTTTTCCGAAGAGAAGCTTTGTAAATGGCTGGTTCAACTCTTGATGGCACTTGACTACTTGCATGCAAACCATATTCTTCATCGTGACTTTGGTCTGGCCAAAATATTGACATCTGATAACCTTGCTTCCTCAGTTGTTGGCACTCCAAGTTACATGTGCCCTGAGCTGCTTGCTGATATACCCTATGGCTCAAAGTCCGATCTCTGGTCTTTAGGTATGGAAATGGCAGCCAAGCCGGCTTTTAAAGCTTTTGATATTCAAGCTttgattaacaaaataaacaagtcTATAGTGGCTCCACTATCAACTATGTATTCTGGTTCTTTtCGAAGGCTTGTCAAAAGTATGCTGCGGAAAAATCCAGAGCCCAGGCCAAGTGCTGCAGAGTTGCTCAATCATCCGCATCTTCAGCCTTATTTCCTTAAAATTCACCTAAAATTGAATAGCCCCAGAACAAATCATTTTCCGTTCCAATGGCCTGAGTCAAAATGTGTAAAGAGAACAAGATTTGTGGAGCCAGGATCAGTTTCCACCATTTCTGACAGAGATAAACGGTTGTCATTCAGCAACGACAGAACCTTACATCCTAGTATTTCTGGAACTGGACATGATTCTCAATGTTCTACTCAAAGAGCAGATGAATCACCCGCTTATTTGGATGCAAAACACCATGAAATATCTGTCAACTGTGAACCCAAGATTGAGAGCAGCCCAGGATTCTATCACCCCCCCAGGAAGCAGACTCCGCCATCAAAGATATCCCGTACCGGTTCAAAACCTGATTCActtCCAGTGTCTCATACTATTGCGGGAAAATCTTCCCCACCACGAACACGTAGAGCATCCCTTCCATTGCCCGTAAGAACAATGGTCTCAGCAACCCCTTATAGAGCTAATATTGGTCTCCTTCAAAGAGTGGACTCTCCAGATGTTTCTGTTAATGCACCGAGGATTGGTAAGATTGCAGATTTTCCCCTGGCCTCTTGCGAGGATCCTCTGTTCCCTGTTCGTAGAACTTCCTCAGCATGTCCACAGTGCTTTTCTAGTTCGCCAGGGAGTGCTGAGTGTTCAATCACAAAAGACAAGGGTACAGTCCAGGTTGTGGACAAAGCCAGTGTCCGTACCAGCGCGACTGATGCTTGTCCTGGAGCTCCTGGATATGGGAGTGAATGCTCGGAGTATAATGTGATAACTGGTGTTTCAAGCCGTTCATCCGGTGAGTCAAGACAGCGTCGGTTCGACACCTCGTCGTACCAGCAACGAGCTGAGGCATTGGATGGTTTGCTTGAGTTCAGTGCACGGCTCCTTCAACAACAGAAGGTTTCTCCAAGGGAAACAACCATGGTTGACCAAGAGCTTCAAAGAAACTGCGGCCTaagaaattttctcataaatctTATGATAGTTGACATTTG 1775 0.4372 MKKLISFTGVVGTPSYMCPELLADIPYGSKSDLWSLGMEMAAKPAFKAFDIQALINKINKSIVAPLSTMYSGSFRRLVKSMLRKNPEPRPSAAELLNHPHLQPYFLKIHLKLNSPRTNHFPFQWPESKCVKRTRFVEPGSVSTISDRDKRLSFSNDRTLHPSISGTGHDSQCSTQRADESPAYLDAKHHEISVNCEPKIESSPGFYHPPRKQTPPSKISRTGSKPDSLPVSHTIAGKSSPPRTRRASLPLPVRTMVSATPYRANIGLLQRVDSPDVSVNAPRIGKIADFPLASCEDPLFPVRRTSSACPQCFSSSPGSAECSITKDKGTVQVVDKASVRTSATDACPGAPGYGSECSEYNVITGVSSRSSGESRQRRFDTSSYQQRAEALDGLLEFSARLLQQQKVSPRETTMVDQELQRNCGLRNFLINLMIVDI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02803 436 MobiDBLite consensus disorder prediction 146 179 - -
Bva13g02803 436 MobiDBLite consensus disorder prediction 156 178 - -
Bva13g02803 436 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 9 195 - -
Bva13g02803 436 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 210 406 - -
Bva13g02803 436 Pfam Protein kinase domain 7 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02803 436 Gene3D Transferase(Phosphotransferase) domain 1 2 156 - -
Bva13g02803 436 MobiDBLite consensus disorder prediction 214 240 - -
Bva13g02803 436 PANTHER SERINE/THREONINE-KINASE NEK4 9 195 - -
Bva13g02803 436 PANTHER SERINE/THREONINE-KINASE NEK4 210 406 - -
Bva13g02803 436 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02803 436 SUPERFAMILY Protein kinase-like (PK-like) 7 159 IPR011009 -
Bva13g02803 436 MobiDBLite consensus disorder prediction 198 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02803 Bva-Chr13 20433828 20439356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02803 12 102 MAP Kinase Kinase Kinase AT4G08500 37.374 3.43e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bva13g02803 Pkinase 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02803 K08857 - gmx:100810347 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02854 04 24441404 24447533 Bva13g02803 13 20433828 20439356 BWGD
Bva13g02803 13 20433828 20439356 Bva13g02803 13 20433828 20439356 ECH