Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02786 ATGAAGATACCTCTTCTAGGCAGAGATGGGTTGAAGGAGATAACAATCGGACTTGTGGCAGTATTTGATGGGCATGGTGGATTTGAGTCCATTGTCCTTGAAGCTTTGAAAGAATCGTTGTTGAAGGCAATACACGTTATCGATGTCAATTTTTCTCAGGCAACCCTTCAGAACAAGAATCTAGCAGGGTCCACAGCCACTGTTGCTTTAATGGTTAATGGGAAAATTTTAGTCAGTAATGTTGGTGCTCGAAGGCCTTTATTTGCTCAGAAAATATCCAAACCGGTGGAGAGAAGGCAGGTgcatattcattcatttttggTTTTGGTTATTTCACCTTCTTTATTAACCAAGGATCATCATCCAGACAGAGATGATGAGAACGCTCGAATTGATGCAGCTGGTGGATCCATTGTTGTGTGGGGTGTACCTCGAGTAAATGGTGTGCTAGCTATGTCCAGATTCATTGGTGATGTGTACCTAAAaagATGTGGCGTTATAGCTGTTCCTGAAATAACACATTGGCTGCCTTTAAACACTACGGATAAATTTTTGATCCTTTCATCCGATGTTATATTTGAAAGCTTGACAAAGAAGACGTCTGTAGTCTGGTGTGGGATATCCCCTTTTGTGCTCATCCTCGGCGTCACTAGCGGAATGTGTTCTAGACACTGCTTTAGAAAGAGGTA 689 0.4093 MKIPLLGRDGLKEITIGLVAVFDGHGGFESIVLEALKESLLKAIHVIDVNFSQATLQNKNLAGSTATVALMVNGKILVSNVGARRPLFAQKISKPVERRQVHIHSFLVLVISPSLLTKDHHPDRDDENARIDAAGGSIVVWGVPRVNGVLAMSRFIGDVYLKRCGVIAVPEITHWLPLNTTDKFLILSSDVIFESLTKKTSVVWCGISPFVLILGVTSGMCSRHCFRKR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02786 229 ProSiteProfiles PPM-type phosphatase domain profile. 1 229 IPR001932 -
Bva13g02786 229 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 33 199 - -
Bva13g02786 229 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 1 30 - -
Bva13g02786 229 Gene3D - 8 206 IPR036457 -
Bva13g02786 229 CDD PP2Cc 9 202 IPR001932 -
Bva13g02786 229 Pfam Protein phosphatase 2C 34 202 IPR001932 -
Bva13g02786 229 ProSitePatterns PPM-type phosphatase domain signature. 18 26 IPR000222 GO:0043169
Bva13g02786 229 PANTHER ALPHABET, ISOFORM E-RELATED 1 30 - -
Bva13g02786 229 PANTHER ALPHABET, ISOFORM E-RELATED 33 199 - -
Bva13g02786 229 SUPERFAMILY PP2C-like 16 199 IPR036457 -
Bva13g02786 229 SMART PP2C_4 5 213 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02786 Bva-Chr13 20360504 20363287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02786 33 196 PP2C-type Phosphatase Gene Family AT3G63320 40.212 1.13e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02786 - - cit:102621785 202.216