Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02783 atgaattatctGTACCCAGTGAAAGAAGAGTACTTTGAAGCATCTTCGTCTCAATTAGGGGGTGACCTAGAAATGAATGCTCCGCCACAGCCCATGGAGGGGCTTCACGATATAGGGCCACCGCCATTTCTGACCAAGACCTTTGATGTGGTAGACGACCCAACTACCTATCATATAGTTTCGTGGAGCAGAGCAGGTACCAGCTTCGTCGTTTGGGATCCGCATGCTTTCTCTACAAGTATCCTTCCCAGATACTTCAAGCACAACAATTTGTCAAGCTTCGTAAGGCAATTAAATACTTATgGGTTTAGAAAAATTGATCCGGATAAGTGGGAATTTGCCAATGAAGGATTCATGAGAGGCCACAAGCATCTTTTGAAGAACATAAGGAGAAGGAAAGCACCTTCTCAGCCTGGTTATTCCCAAGAAGCACAAGGTTGTGTTGAATTAGGCCAATTTGGACTTGATGAAGAAGTTGATTGCTTGAGACGTGACAAGCAGGTCCTAATGATTGAACTCGTGAAGCTTAGACAGCAGCAGCAGAACACTAGAGCCTACCTTCAAGCAATGGAGGAAAGATTACAAGGAACTGAAAGGAAGCAGCAACAGATGATGGCTTTCTTAGCCAGAGCCATGAAAAATCCAGCCTTTCTTCAGCAGCTAGTTCAGAACAAAGAGCAGAGAAAAGAGCTTGAAGAAGCCATgaccaaaaagagaagaaggcCTGTTGAGCAAGGGCCAAGCAGTAGTGGGGCAGAAAAGGACACTGTCAAAATTGAACCACATGAGTTTGGAGATTATGGGAATCAAGTGTCAGAATTGGAGGTTCTGGCTATGGAAATGCAGGGTTATGGTaaggggagaagagaaaacgAAGAGGCATTAGAATCATCAGAGAAGCTGGAAAAAGAACTAGATGAAGGGTTCTGGGAAGAATTATTCAGTGAAAATTTCGAaggtgaagatgaagatgtcAATGTCTTGGCCAATCGCTTTGGTTACTTAGGTTCAAGCCCTCGATA 1022 0.411 MNYLYPVKEEYFEASSSQLGGDLEMNAPPQPMEGLHDIGPPPFLTKTFDVVDDPTTYHIVSWSRAGTSFVVWDPHAFSTSILPRYFKHNNLSSFVRQLNTYGFRKIDPDKWEFANEGFMRGHKHLLKNIRRRKAPSQPGYSQEAQGCVELGQFGLDEEVDCLRRDKQVLMIELVKLRQQQQNTRAYLQAMEERLQGTERKQQQMMAFLARAMKNPAFLQQLVQNKEQRKELEEAMTKKRRRPVEQGPSSSGAEKDTVKIEPHEFGDYGNQVSELEVLAMEMQGYGKGRRENEEALESSEKLEKELDEGFWEELFSENFEGEDEDVNVLANRFGYLGSSPR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02783 340 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 323 IPR027725 -
Bva13g02783 340 Gene3D - 36 133 IPR036388 -
Bva13g02783 340 MobiDBLite consensus disorder prediction 228 263 - -
Bva13g02783 340 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 10 323 - -
Bva13g02783 340 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Bva13g02783 340 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g02783 340 MobiDBLite consensus disorder prediction 228 244 - -
Bva13g02783 340 Coils Coil 159 193 - -
Bva13g02783 340 Coils Coil 221 241 - -
Bva13g02783 340 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02783 Bva-Chr13 20349606 20352868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02783 29 338 HSF AT3G22830 52.958 4.90e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva13g02783 HSF_DNA-bind 2.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02783 K09419 - gmx:100794264 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02848 04 24405614 24407936 Bva13g02783 13 20349606 20352868 BWGD