Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02782 ATGTTTCCTGGAGCCATGTCCAATTCTACTTCTTTGTCCGAAGAAGCTAGTGTGTCTTCTGGCATAAGAGTCCAGGACTTTGCTGGATTAAACGGTGTAGTTTCAACTGTTTCTCCTCAGCAACCTcagaagatcaagaaaaagagaagccTACCAGGAAATCCAGACCCAGAAGCTGAGGTGATTGCTTTGTCCCCAAAGACCCTTTTGGCCACCAATAGATTTGTGTGTGAGATCTGCAACAAGGGTTTTCAAAGAGATCAGAACCTTCAACTTCACAGAAGAGGCCATAACCTTCCATGGAAGCTCAAGCAAAGAAACAGCAAAGAGGTCAAAAAGAAAGCCTATGTTTGCCCCGAGCCTTCATGCGTTCACCACAATCCATCAAGGGCTCTGGGTGATCTTACAGGAATTAAGAAACACTACTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTGAAAAGTGCTCAAAGATCTATGCAGTTCAGTCAGATTGGAAGGCTCATTCCAAAACCTGTGGAACAAGAGAATATAGATGCGATTGTGGAACCCTTTTCTCCagGAAGGACAGCTTCATTACTCATAGGGCATTCTGTGATGCGTTGGCTGAAGAAAGTGCAAGACTCTCCGCAAACCAAATAGCTACCACAAATCCATTGGttcaatctctctttcttttcccaaACCAACACAACTTCCTCAATCCATGGAACCCATCTCCggaaaaccctaaccctaataACTTTGTTAATGCCGGTTCTGCCCTCCAAATCAAGCCTGAAGCTCAGCACTTCCAGATCCCCACACTCTCTTCTTCATCGTTCCTTCATCAACCACAATTCCAAGACCACAAGATCAGCGTACCCATGATAAACTCACCCTTCCACGTCACCACGCAACCTTCCTCAAATAATGCCACGTCAGCTCACATGTCAGCCACTGCGCTCCTTCAGAAGGCTGCAACGATTGGTGCTACAGCTATTCCTGGCCCATCtcctgcttctgcttctgccgTTGGCGTTGGGCAATTGGGTCACGTGACTCAGCTCGGCATGGCCGAGTTTGGAACAATGAGTCAACTCGACTCGGTGGGTCAGGACTACGTCAATGTGAGAGGCTTCGCGTCCCGGAATCTTAAGGATGACCGTCTCACGAGGGACTTTCTGGGTCTAACTGGGGACGCCAACGGTAGTGACGGAGGAAATAACGGGGCCGTCAACGTCAAGGATATGCTGACTTTCACGGGGGGCGCAGCCGTAGGGTACCAACCATACGAAcatcaccaccaccacccGCTCTTCAAGTCGCAACAAAGTTTTGGATTTGTTGGGACTACCACTGTCCCGGAGACGTGGGGGAATTGTTg 1367 0.447 MFPGAMSNSTSLSEEASVSSGIRVQDFAGLNGVVSTVSPQQPQKIKKKRSLPGNPDPEAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKKAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQIATTNPLVQSLFLFPNQHNFLNPWNPSPENPNPNNFVNAGSALQIKPEAQHFQIPTLSSSSFLHQPQFQDHKISVPMINSPFHVTTQPSSNNATSAHMSATALLQKAATIGATAIPGPSPASASAVGVGQLGHVTQLGMAEFGTMSQLDSVGQDYVNVRGFASRNLKDDRLTRDFLGLTGDANGSDGGNNGAVNVKDMLTFTGGAAVGYQPYEHHHHHPLFKSQQSFGFVGTTTVPETWGNC 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02782 455 MobiDBLite consensus disorder prediction 35 58 - -
Bva13g02782 455 Pfam Zinc finger, C2H2 type 75 97 IPR013087 -
Bva13g02782 455 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Bva13g02782 455 SUPERFAMILY beta-beta-alpha zinc fingers 74 171 IPR036236 -
Bva13g02782 455 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 434 - -
Bva13g02782 455 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 8 434 - -
Bva13g02782 455 Gene3D Classic Zinc Finger 54 123 - -
Bva13g02782 455 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 97 IPR013087 -
Bva13g02782 455 Gene3D Classic Zinc Finger 144 208 - -
Bva13g02782 455 SMART c2h2final6 75 97 IPR013087 -
Bva13g02782 455 SMART c2h2final6 151 171 IPR013087 -
Bva13g02782 455 SMART c2h2final6 116 146 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02782 Bva-Chr13 20339243 20343189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02782 15 444 IDZ Gene Family AT4G02670 51.474 2.20e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g02782 zf-C2H2 0.0045 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02782 K25870 - gmx:100780056 568.926