Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02770 ATGAAAATACCAGATAACCTGTTGTCCAGTAATGCGAGCCCCGAATGGATGAACAAGGCAGACAACGCGTGGCAGCTAACAGCAGCCACATTGGTGGGGCTTCAAAGCGTGCCAGGTCTTGTCATCCTTTATGGTAGCATagtgaagaagaaatgggCAGTGAATTCGGCATTTATGGCCCTCTATGCGTTTGCAGCTGTGCTGGTTTGCTGGGTTGGGTGTTGCTACCAGATGTCATTCGGTGAAAAAATTCTACCATTTCTTGGACGACCAAACACGGCCTTTGGCCAAGCATACCTTATGAGGCCAGCATTTTCAGGGAACATCCCTAATGCCACTATGATATATTTTCAGTTCGCGTTTGCTGCTATTACGTTGATTCTTATAGGAGGGGCGTTGCTGGGAAGAATGAACTTTCTTGCGTGGATGTTGTTTGTCCCACTTTGGGTCACTTTATCATACACCATATGTGCCTTTAGCATATGGTGCCAGGAAGGATGGTTGTATAAAATGGGCATCATTGATTACTCCGGAGGCTACGTTATTCATATTTCTTCTGGGGTTGCTGGTTTTACTGCAGCTTACTGGGTAGGGCCAAGGGCAACGAAGGATAGAGAGAGATTCCCTCCAAACAACATACTCCTAATGCTGGCAGGGGCTGGCCTACTATGGATGGGATGGACAGGATTCAACGGTGGAGATCCTTACAATATCAGCTTGGATGCCTCTCTCGCCGTCCTTAACACCCACATATGTACAGCCATGAGCTTGCTGACGTGGCTTCTCTTTGACATTCTATTCTTTGGGAAGCCTTCTGTCATTGGTGCTACTCAAGGCATGATCACCGGTTTGGTCTGCATAACCCCTGCCGCAGGTGTGGTGCAAAGTTGGGCAGCACTGTTGATGGGGATACTGTCAGGAAGCATCCCATGGTTCACGATGATGGTGCTGCACAGACAAGTGCGGCTGCTGAAACAAGTTGATGATACTTTGGCAGTTTTCCACACCCATGCTGTGGCAGGTTGCTTAGGCGGCATTCTAACGGGTTTTTTCTCAGACCCAAAGCTATGTCGCATCTTCTACTTGGGACAAGATTGGCAGCACTATGTAGGGCTTGTTTATGGGATTCAGGAAGGGAGAGCAAATGCAGGGTTAAAGCAAATGAGGGTTCAGCTTTTTGGGATTCTTTTTGTCGTTATACTCAATGTTACCTCGACTAGCATTGTGTGTTTTTTGATTAAGTTAATACTTCCTCTGAGGTTGGAAGAGGAAGAGCTGCAAATTGGGGACGAGGCTGTCCATGGCGAGCTAGCTTATGCATTGTGGGGTGAAGGAGAGAGATTTGAGATTGAGAGCTCAAATAAGAATGAGACTACTGAGAGTGAGGGGCTTCGACATGAGTGGCCATCTCTGGGACTGAAAGATTCAGCTCAGGAGATTCAACCAGCATA 1451 0.4686 MKIPDNLLSSNASPEWMNKADNAWQLTAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLVCWVGCCYQMSFGEKILPFLGRPNTAFGQAYLMRPAFSGNIPNATMIYFQFAFAAITLILIGGALLGRMNFLAWMLFVPLWVTLSYTICAFSIWCQEGWLYKMGIIDYSGGYVIHISSGVAGFTAAYWVGPRATKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYNISLDASLAVLNTHICTAMSLLTWLLFDILFFGKPSVIGATQGMITGLVCITPAAGVVQSWAALLMGILSGSIPWFTMMVLHRQVRLLKQVDDTLAVFHTHAVAGCLGGILTGFFSDPKLCRIFYLGQDWQHYVGLVYGIQEGRANAGLKQMRVQLFGILFVVILNVTSTSIVCFLIKLILPLRLEEEELQIGDEAVHGELAYALWGEGERFEIESSNKNETTESEGLRHEWPSLGLKDSAQEIQPA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02770 483 MobiDBLite consensus disorder prediction 451 469 - -
Bva13g02770 483 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva13g02770 483 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 1 459 - -
Bva13g02770 483 SUPERFAMILY Ammonium transporter 16 421 - -
Bva13g02770 483 Pfam Ammonium Transporter Family 23 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva13g02770 483 MobiDBLite consensus disorder prediction 451 483 - -
Bva13g02770 483 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005887
Bva13g02770 483 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005887
Bva13g02770 483 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Bva13g02770 483 PANTHER AMMONIUM TRANSPORTER MEP2 1 459 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva13g02770 483 TIGRFAM amt: ammonium transporter 21 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva13g02770 483 Gene3D Ammonium transporter AmtB like domains 5 458 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02770 Bva-Chr13 20248600 20250349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02770 112 462 Inorganic Solute Cotransporters AT2G38290 58.120 7.57e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02770 K03320 - pop:7480666 716.457