Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02764 ATGGACACGCATTCTTCGCATGGTGCGGGACCCATTCGTTCCAGGAGTTCCCAGTCCCCTTCTCCTTCACACTCCGCCTCGGCCTCTGCTACTTCCTCCATCCACAAGCGGAAGCTGCCGCCTGAAGACCACGCGCCTCCTTTTCCACCGTCCTCCTTCTCCGCCGACACCCGTGATGGCGCCTTAACTTCGAATGACGATCTTGAGAGCATTTCGGCTCGCGGAGCTGACTCCGACTCCGACGACGACTCTGAGGACGCCGtggttgatgatgatgaggagGACTACGATAACGACTCCTCAATGCGGACCTTCACCGCCGCAAGGCTTGAGAACACTGCCTCTGCTCCGCGGAACACAAAGCTCAAAACTGAGAATTCAACGATCAAGATAGAGAATTCAGATGGTGTGAAAGACGGTGGAACCACTGGGACTGGTGCTGTGGGTACAACTGCCACTGGGAGCTCCGTTCCCGGTATTGTGGTTAAGGAGGACGCGACCAAAATATTTACCGATAATTTACAGACGAGTGGAGCTTATAGTGCCAGGGAAGAGAGTCTCAAGAGAGAGGAAGAAGCAGGAAGGCTCAAATTTGTATGTTATTCAAATGATGGCGTTGATGACCATATGGTTtgGTTGATAGGgttgaagaatatttttgcTAGACAACTACCAAATATGCCCAAGGAGTACATTGTCCGACTTGTGATGGATAGGAGCCATAAGTCTGTTATGGTTATAAGACGTAATCAAGTTGTTGGTGGCATTACATATCGCCCGTATGTAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATAACTGCTGATGAGCAAGTAAAAGGTTATGGTACCAGACTGATGAATCACTTGAAACAGCATGCACGTGATGTTGATGGCCTGACACATTTTCTCACGTATGCTGATAACAATGCTGTTGGTTATTTTATCAAGCAGGGCTTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGtatataaaagattatgaTGGAGGAATTCtcatggaatgcaagattgACCCAAAGCTCCCGTACACTGATTTATCAACTATGATTCGTCGTCAAAGGCAGGCAATTGATGAAAAGATAAGAGAGCTATCAAACTGTCACATTGTTTATCCTGGAATTGATTTTCAGAAGAAAGAAGCTGGTatacctaaaaaaattatcaaagtcgAGGATATCCCTGGTTTGAGAGAGGCTGGATGGACCCCTGATCAATGGGTTCATTCACGATTTAGAACTTTAAGTGCTTCTACAGATAGTGCCACAAATCAAAAACATTTGACTGCATTTATGCGTTCACTTTTAAAGGCAATGCACGATCATGTCGATGCCTGGCCATTTAAGGACCCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCAAAAAGAGTGGAGTCGGAGCAATATTATGTCACGTTTGAGATGTTCGTGGAGGATGCCAAACGAATGTTCGCCAATGCACGCACCTACAACTCTCCAGAGACAATTTATTACAAATGTTCTACAAGGCTAGAATCTCATTTTCATAGCAAAGTTCAACAAGGTCTGCAATCTGGTGCCAAGATTCAGTA 1643 0.4334 MDTHSSHGAGPIRSRSSQSPSPSHSASASATSSIHKRKLPPEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEEDYDNDSSMRTFTAARLENTASAPRNTKLKTENSTIKIENSDGVKDGGTTGTGAVGTTATGSSVPGIVVKEDATKIFTDNLQTSGAYSAREESLKREEEAGRLKFVCYSNDGVDDHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNQVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKIIKVEDIPGLREAGWTPDQWVHSRFRTLSASTDSATNQKHLTAFMRSLLKAMHDHVDAWPFKDPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVEDAKRMFANARTYNSPETIYYKCSTRLESHFHSKVQQGLQSGAKIQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02764 547 MobiDBLite consensus disorder prediction 1 104 - -
Bva13g02764 547 ProSitePatterns Bromodomain signature. 456 514 IPR018359 -
Bva13g02764 547 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 206 355 IPR016181 -
Bva13g02764 547 SUPERFAMILY Bromodomain 428 538 IPR036427 GO:0005515
Bva13g02764 547 CDD NAT_SF 243 297 - -
Bva13g02764 547 PRINTS Bromodomain signature 454 467 IPR001487 GO:0005515
Bva13g02764 547 PRINTS Bromodomain signature 484 502 IPR001487 GO:0005515
Bva13g02764 547 PRINTS Bromodomain signature 468 484 IPR001487 GO:0005515
Bva13g02764 547 PRINTS Bromodomain signature 503 522 IPR001487 GO:0005515
Bva13g02764 547 MobiDBLite consensus disorder prediction 56 71 - -
Bva13g02764 547 ProSiteProfiles Bromodomain profile. 451 522 IPR001487 GO:0005515
Bva13g02764 547 PANTHER BNAC04G26160D PROTEIN 1 547 - -
Bva13g02764 547 MobiDBLite consensus disorder prediction 79 98 - -
Bva13g02764 547 Pfam Acetyltransferase (GNAT) family 243 321 IPR000182 GO:0016407
Bva13g02764 547 Gene3D - 422 544 IPR036427 GO:0005515
Bva13g02764 547 SMART bromo_6 432 541 IPR001487 GO:0005515
Bva13g02764 547 CDD Bromo_gcn5_like 439 537 - -
Bva13g02764 547 PANTHER GH11602P 1 547 IPR037800 GO:0004402
Bva13g02764 547 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 203 350 IPR000182 GO:0016407
Bva13g02764 547 Gene3D - 192 356 - -
Bva13g02764 547 MobiDBLite consensus disorder prediction 1 34 - -
Bva13g02764 547 Pfam Bromodomain 444 526 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02764 Bva-Chr13 20213960 20219432 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Bva13g02764 Bromodomain 3.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02764 K06062 - gmx:100791610 898.271