Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02760 ATGGCAAATAACCCTTCTGAGGCCCCAACCGACGACTTCCTCGAACAAATTCTTGGCCTTCCAAATTTTCCTTCCACCGACTCAGGCTTGGGTGGAGCTGATGCTGGCTTGGGGGGTGCGGGTGCCCCTGCTCCCATGATGCTGCAGCTCAACTCCGGCGATGGCACCGGCCACCTGGCCGCTGTTGGAGGCGGCGGCGGAAGTGGATTTCATGGACCAGTGTACCAGTTAGGCTTGAGCTTGGAGCAAGGAAAAGGAGGATTTTTGAAGCCCGAGGACGCTTCAGGGAGTGGAAAGCGTTTTCGCGACGACGTCGTTGACAGTAGAGCTAAGAATGTTTTTCACGGCCAACCCATGCCTACTCCCATCCCTGCTGCTCCACACCCGCCGGCAATGCGACCAAGGGTACGAGCTAGACGAGGGCAGGCTACAGACCCACACAGCATAGCTGAACGATTGCGCAGGGAAAGAATTGCAGAGAGAATAAGGGCTTTGCAGGAACTAGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGATGAAATTGTGGATTACGTTAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGGGGAGCTGGTGCTGTGGCTCCGCTAGTAACAGACATCCCATTATCATCTGTTGAGGAAGAAGGCAGCGAAGGTGGAAGAAATCAACCAGCCTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTCCTTCAATCAAAAGCTCTTTGCATCATGCCCATTTCACTGGCATCAGCAATATACCAGTCGCAGCCACCAGACACCTCTAGTATAGTGAAGCCTGAAACTAATCCTCCTTCGTA 896 0.5212 MANNPSEAPTDDFLEQILGLPNFPSTDSGLGGADAGLGGAGAPAPMMLQLNSGDGTGHLAAVGGGGGSGFHGPVYQLGLSLEQGKGGFLKPEDASGSGKRFRDDVVDSRAKNVFHGQPMPTPIPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02760 298 MobiDBLite consensus disorder prediction 113 133 - -
Bva13g02760 298 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 287 - -
Bva13g02760 298 MobiDBLite consensus disorder prediction 222 241 - -
Bva13g02760 298 Pfam Helix-loop-helix DNA-binding domain 147 191 IPR011598 GO:0046983
Bva13g02760 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 191 IPR011598 GO:0046983
Bva13g02760 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 201 IPR036638 GO:0046983
Bva13g02760 298 Gene3D - 137 199 IPR036638 GO:0046983
Bva13g02760 298 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 287 - -
Bva13g02760 298 SMART finulus 148 197 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02760 Bva-Chr13 20199726 20203792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02760 70 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 82.553 2.77e-123 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g02760 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02760 - - gmx:100797789 441.425